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A statistical inference approach to reconstruct intercellular interactions in cell migration experiments
Migration of cells can be characterized by two prototypical types of motion: individual and collective migration. We propose a statistical inference approach designed to detect the presence of cell-cell interactions that give rise to collective behaviors in cell motility experiments. This inference...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Association for the Advancement of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7065881/ https://www.ncbi.nlm.nih.gov/pubmed/32195344 http://dx.doi.org/10.1126/sciadv.aay2103 |
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author | Agliari, Elena Sáez, Pablo J. Barra, Adriano Piel, Matthieu Vargas, Pablo Castellana, Michele |
author_facet | Agliari, Elena Sáez, Pablo J. Barra, Adriano Piel, Matthieu Vargas, Pablo Castellana, Michele |
author_sort | Agliari, Elena |
collection | PubMed |
description | Migration of cells can be characterized by two prototypical types of motion: individual and collective migration. We propose a statistical inference approach designed to detect the presence of cell-cell interactions that give rise to collective behaviors in cell motility experiments. This inference method has been first successfully tested on synthetic motional data and then applied to two experiments. In the first experiment, cells migrate in a wound-healing model: When applied to this experiment, the inference method predicts the existence of cell-cell interactions, correctly mirroring the strong intercellular contacts that are present in the experiment. In the second experiment, dendritic cells migrate in a chemokine gradient. Our inference analysis does not provide evidence for interactions, indicating that cells migrate by sensing independently the chemokine source. According to this prediction, we speculate that mature dendritic cells disregard intercellular signals that could otherwise delay their arrival to lymph vessels. |
format | Online Article Text |
id | pubmed-7065881 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Association for the Advancement of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-70658812020-03-19 A statistical inference approach to reconstruct intercellular interactions in cell migration experiments Agliari, Elena Sáez, Pablo J. Barra, Adriano Piel, Matthieu Vargas, Pablo Castellana, Michele Sci Adv Research Articles Migration of cells can be characterized by two prototypical types of motion: individual and collective migration. We propose a statistical inference approach designed to detect the presence of cell-cell interactions that give rise to collective behaviors in cell motility experiments. This inference method has been first successfully tested on synthetic motional data and then applied to two experiments. In the first experiment, cells migrate in a wound-healing model: When applied to this experiment, the inference method predicts the existence of cell-cell interactions, correctly mirroring the strong intercellular contacts that are present in the experiment. In the second experiment, dendritic cells migrate in a chemokine gradient. Our inference analysis does not provide evidence for interactions, indicating that cells migrate by sensing independently the chemokine source. According to this prediction, we speculate that mature dendritic cells disregard intercellular signals that could otherwise delay their arrival to lymph vessels. American Association for the Advancement of Science 2020-03-11 /pmc/articles/PMC7065881/ /pubmed/32195344 http://dx.doi.org/10.1126/sciadv.aay2103 Text en Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC). http://creativecommons.org/licenses/by-nc/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (http://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited. |
spellingShingle | Research Articles Agliari, Elena Sáez, Pablo J. Barra, Adriano Piel, Matthieu Vargas, Pablo Castellana, Michele A statistical inference approach to reconstruct intercellular interactions in cell migration experiments |
title | A statistical inference approach to reconstruct intercellular interactions in cell migration experiments |
title_full | A statistical inference approach to reconstruct intercellular interactions in cell migration experiments |
title_fullStr | A statistical inference approach to reconstruct intercellular interactions in cell migration experiments |
title_full_unstemmed | A statistical inference approach to reconstruct intercellular interactions in cell migration experiments |
title_short | A statistical inference approach to reconstruct intercellular interactions in cell migration experiments |
title_sort | statistical inference approach to reconstruct intercellular interactions in cell migration experiments |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7065881/ https://www.ncbi.nlm.nih.gov/pubmed/32195344 http://dx.doi.org/10.1126/sciadv.aay2103 |
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