Cargando…

A statistical inference approach to reconstruct intercellular interactions in cell migration experiments

Migration of cells can be characterized by two prototypical types of motion: individual and collective migration. We propose a statistical inference approach designed to detect the presence of cell-cell interactions that give rise to collective behaviors in cell motility experiments. This inference...

Descripción completa

Detalles Bibliográficos
Autores principales: Agliari, Elena, Sáez, Pablo J., Barra, Adriano, Piel, Matthieu, Vargas, Pablo, Castellana, Michele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7065881/
https://www.ncbi.nlm.nih.gov/pubmed/32195344
http://dx.doi.org/10.1126/sciadv.aay2103
_version_ 1783505140073889792
author Agliari, Elena
Sáez, Pablo J.
Barra, Adriano
Piel, Matthieu
Vargas, Pablo
Castellana, Michele
author_facet Agliari, Elena
Sáez, Pablo J.
Barra, Adriano
Piel, Matthieu
Vargas, Pablo
Castellana, Michele
author_sort Agliari, Elena
collection PubMed
description Migration of cells can be characterized by two prototypical types of motion: individual and collective migration. We propose a statistical inference approach designed to detect the presence of cell-cell interactions that give rise to collective behaviors in cell motility experiments. This inference method has been first successfully tested on synthetic motional data and then applied to two experiments. In the first experiment, cells migrate in a wound-healing model: When applied to this experiment, the inference method predicts the existence of cell-cell interactions, correctly mirroring the strong intercellular contacts that are present in the experiment. In the second experiment, dendritic cells migrate in a chemokine gradient. Our inference analysis does not provide evidence for interactions, indicating that cells migrate by sensing independently the chemokine source. According to this prediction, we speculate that mature dendritic cells disregard intercellular signals that could otherwise delay their arrival to lymph vessels.
format Online
Article
Text
id pubmed-7065881
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher American Association for the Advancement of Science
record_format MEDLINE/PubMed
spelling pubmed-70658812020-03-19 A statistical inference approach to reconstruct intercellular interactions in cell migration experiments Agliari, Elena Sáez, Pablo J. Barra, Adriano Piel, Matthieu Vargas, Pablo Castellana, Michele Sci Adv Research Articles Migration of cells can be characterized by two prototypical types of motion: individual and collective migration. We propose a statistical inference approach designed to detect the presence of cell-cell interactions that give rise to collective behaviors in cell motility experiments. This inference method has been first successfully tested on synthetic motional data and then applied to two experiments. In the first experiment, cells migrate in a wound-healing model: When applied to this experiment, the inference method predicts the existence of cell-cell interactions, correctly mirroring the strong intercellular contacts that are present in the experiment. In the second experiment, dendritic cells migrate in a chemokine gradient. Our inference analysis does not provide evidence for interactions, indicating that cells migrate by sensing independently the chemokine source. According to this prediction, we speculate that mature dendritic cells disregard intercellular signals that could otherwise delay their arrival to lymph vessels. American Association for the Advancement of Science 2020-03-11 /pmc/articles/PMC7065881/ /pubmed/32195344 http://dx.doi.org/10.1126/sciadv.aay2103 Text en Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC). http://creativecommons.org/licenses/by-nc/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (http://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.
spellingShingle Research Articles
Agliari, Elena
Sáez, Pablo J.
Barra, Adriano
Piel, Matthieu
Vargas, Pablo
Castellana, Michele
A statistical inference approach to reconstruct intercellular interactions in cell migration experiments
title A statistical inference approach to reconstruct intercellular interactions in cell migration experiments
title_full A statistical inference approach to reconstruct intercellular interactions in cell migration experiments
title_fullStr A statistical inference approach to reconstruct intercellular interactions in cell migration experiments
title_full_unstemmed A statistical inference approach to reconstruct intercellular interactions in cell migration experiments
title_short A statistical inference approach to reconstruct intercellular interactions in cell migration experiments
title_sort statistical inference approach to reconstruct intercellular interactions in cell migration experiments
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7065881/
https://www.ncbi.nlm.nih.gov/pubmed/32195344
http://dx.doi.org/10.1126/sciadv.aay2103
work_keys_str_mv AT agliarielena astatisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments
AT saezpabloj astatisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments
AT barraadriano astatisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments
AT pielmatthieu astatisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments
AT vargaspablo astatisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments
AT castellanamichele astatisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments
AT agliarielena statisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments
AT saezpabloj statisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments
AT barraadriano statisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments
AT pielmatthieu statisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments
AT vargaspablo statisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments
AT castellanamichele statisticalinferenceapproachtoreconstructintercellularinteractionsincellmigrationexperiments