Cargando…
Urinary proteomics of Henoch-Schönlein purpura nephritis in children using liquid chromatography-tandem mass spectrometry
BACKGROUND: Henoch-Schönlein purpura nephritis (HSPN) is the principal cause of morbidity and mortality in children with Henoch-Schönlein purpura (HSP). However, the criteria for risk assessment currently used is not satisfactory. The urine proteome may provide important clues to indicate the develo...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7066733/ https://www.ncbi.nlm.nih.gov/pubmed/32190014 http://dx.doi.org/10.1186/s12014-020-09274-x |
_version_ | 1783505298379505664 |
---|---|
author | Fang, Xiang Wu, Heyan Lu, Mei Cao, Yan Wang, Ren Wang, Meiqiu Gao, Chunlin Xia, Zhengkun |
author_facet | Fang, Xiang Wu, Heyan Lu, Mei Cao, Yan Wang, Ren Wang, Meiqiu Gao, Chunlin Xia, Zhengkun |
author_sort | Fang, Xiang |
collection | PubMed |
description | BACKGROUND: Henoch-Schönlein purpura nephritis (HSPN) is the principal cause of morbidity and mortality in children with Henoch-Schönlein purpura (HSP). However, the criteria for risk assessment currently used is not satisfactory. The urine proteome may provide important clues to indicate the development of HSPN. METHODS: Here, we detected and compared the urine proteome of patients with HSPN and healthy controls by liquid chromatography-tandem mass spectrometry (LC–MS/MS) in the data-independent acquisition (DIA) mode. The differentially expressed proteins were analysed by gene ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. For validation, enzyme-linked immunosorbent assay (ELISA) was used to analyse the selected proteins. RESULTS: A total of 125 proteins (29 upregulated and 96 downregulated) were found to be differentially expressed in children with HSPN compared with the controls. Forty-one proteins were predicted to have direct interactions. The enriched pathways mainly included focal adhesion, cell adhesion molecules, the PI3K-Akt signalling pathway, ECM-receptor interactions and so on. Cell adhesion related to the pathogenesis of HSPN was the main biological process identified in this study. The decrease in two proteins (integrin beta-1 and tenascin) was validated by ELISA. CONCLUSIONS: Our study provides new insights into the assessment of HSPN progression in children, as well as new potential biomarkers. The data confirm the value of the urinary proteome in capturing the emergence of HSPN. |
format | Online Article Text |
id | pubmed-7066733 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-70667332020-03-18 Urinary proteomics of Henoch-Schönlein purpura nephritis in children using liquid chromatography-tandem mass spectrometry Fang, Xiang Wu, Heyan Lu, Mei Cao, Yan Wang, Ren Wang, Meiqiu Gao, Chunlin Xia, Zhengkun Clin Proteomics Research BACKGROUND: Henoch-Schönlein purpura nephritis (HSPN) is the principal cause of morbidity and mortality in children with Henoch-Schönlein purpura (HSP). However, the criteria for risk assessment currently used is not satisfactory. The urine proteome may provide important clues to indicate the development of HSPN. METHODS: Here, we detected and compared the urine proteome of patients with HSPN and healthy controls by liquid chromatography-tandem mass spectrometry (LC–MS/MS) in the data-independent acquisition (DIA) mode. The differentially expressed proteins were analysed by gene ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. For validation, enzyme-linked immunosorbent assay (ELISA) was used to analyse the selected proteins. RESULTS: A total of 125 proteins (29 upregulated and 96 downregulated) were found to be differentially expressed in children with HSPN compared with the controls. Forty-one proteins were predicted to have direct interactions. The enriched pathways mainly included focal adhesion, cell adhesion molecules, the PI3K-Akt signalling pathway, ECM-receptor interactions and so on. Cell adhesion related to the pathogenesis of HSPN was the main biological process identified in this study. The decrease in two proteins (integrin beta-1 and tenascin) was validated by ELISA. CONCLUSIONS: Our study provides new insights into the assessment of HSPN progression in children, as well as new potential biomarkers. The data confirm the value of the urinary proteome in capturing the emergence of HSPN. BioMed Central 2020-03-12 /pmc/articles/PMC7066733/ /pubmed/32190014 http://dx.doi.org/10.1186/s12014-020-09274-x Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Fang, Xiang Wu, Heyan Lu, Mei Cao, Yan Wang, Ren Wang, Meiqiu Gao, Chunlin Xia, Zhengkun Urinary proteomics of Henoch-Schönlein purpura nephritis in children using liquid chromatography-tandem mass spectrometry |
title | Urinary proteomics of Henoch-Schönlein purpura nephritis in children using liquid chromatography-tandem mass spectrometry |
title_full | Urinary proteomics of Henoch-Schönlein purpura nephritis in children using liquid chromatography-tandem mass spectrometry |
title_fullStr | Urinary proteomics of Henoch-Schönlein purpura nephritis in children using liquid chromatography-tandem mass spectrometry |
title_full_unstemmed | Urinary proteomics of Henoch-Schönlein purpura nephritis in children using liquid chromatography-tandem mass spectrometry |
title_short | Urinary proteomics of Henoch-Schönlein purpura nephritis in children using liquid chromatography-tandem mass spectrometry |
title_sort | urinary proteomics of henoch-schönlein purpura nephritis in children using liquid chromatography-tandem mass spectrometry |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7066733/ https://www.ncbi.nlm.nih.gov/pubmed/32190014 http://dx.doi.org/10.1186/s12014-020-09274-x |
work_keys_str_mv | AT fangxiang urinaryproteomicsofhenochschonleinpurpuranephritisinchildrenusingliquidchromatographytandemmassspectrometry AT wuheyan urinaryproteomicsofhenochschonleinpurpuranephritisinchildrenusingliquidchromatographytandemmassspectrometry AT lumei urinaryproteomicsofhenochschonleinpurpuranephritisinchildrenusingliquidchromatographytandemmassspectrometry AT caoyan urinaryproteomicsofhenochschonleinpurpuranephritisinchildrenusingliquidchromatographytandemmassspectrometry AT wangren urinaryproteomicsofhenochschonleinpurpuranephritisinchildrenusingliquidchromatographytandemmassspectrometry AT wangmeiqiu urinaryproteomicsofhenochschonleinpurpuranephritisinchildrenusingliquidchromatographytandemmassspectrometry AT gaochunlin urinaryproteomicsofhenochschonleinpurpuranephritisinchildrenusingliquidchromatographytandemmassspectrometry AT xiazhengkun urinaryproteomicsofhenochschonleinpurpuranephritisinchildrenusingliquidchromatographytandemmassspectrometry |