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A machine learning approach on multiscale texture analysis for breast microcalcification diagnosis

BACKGROUND: Screening programs use mammography as primary diagnostic tool for detecting breast cancer at an early stage. The diagnosis of some lesions, such as microcalcifications, is still difficult today for radiologists. In this paper, we proposed an automatic binary model for discriminating tiss...

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Autores principales: Fanizzi, Annarita, Basile, Teresa M. A., Losurdo, Liliana, Bellotti, Roberto, Bottigli, Ubaldo, Dentamaro, Rosalba, Didonna, Vittorio, Fausto, Alfonso, Massafra, Raffaella, Moschetta, Marco, Popescu, Ondina, Tamborra, Pasquale, Tangaro, Sabina, La Forgia, Daniele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7069158/
https://www.ncbi.nlm.nih.gov/pubmed/32164532
http://dx.doi.org/10.1186/s12859-020-3358-4
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author Fanizzi, Annarita
Basile, Teresa M. A.
Losurdo, Liliana
Bellotti, Roberto
Bottigli, Ubaldo
Dentamaro, Rosalba
Didonna, Vittorio
Fausto, Alfonso
Massafra, Raffaella
Moschetta, Marco
Popescu, Ondina
Tamborra, Pasquale
Tangaro, Sabina
La Forgia, Daniele
author_facet Fanizzi, Annarita
Basile, Teresa M. A.
Losurdo, Liliana
Bellotti, Roberto
Bottigli, Ubaldo
Dentamaro, Rosalba
Didonna, Vittorio
Fausto, Alfonso
Massafra, Raffaella
Moschetta, Marco
Popescu, Ondina
Tamborra, Pasquale
Tangaro, Sabina
La Forgia, Daniele
author_sort Fanizzi, Annarita
collection PubMed
description BACKGROUND: Screening programs use mammography as primary diagnostic tool for detecting breast cancer at an early stage. The diagnosis of some lesions, such as microcalcifications, is still difficult today for radiologists. In this paper, we proposed an automatic binary model for discriminating tissue in digital mammograms, as support tool for the radiologists. In particular, we compared the contribution of different methods on the feature selection process in terms of the learning performances and selected features. RESULTS: For each ROI, we extracted textural features on Haar wavelet decompositions and also interest points and corners detected by using Speeded Up Robust Feature (SURF) and Minimum Eigenvalue Algorithm (MinEigenAlg). Then a Random Forest binary classifier is trained on a subset of a sub-set features selected by two different kinds of feature selection techniques, such as filter and embedded methods. We tested the proposed model on 260 ROIs extracted from digital mammograms of the BCDR public database. The best prediction performance for the normal/abnormal and benign/malignant problems reaches a median AUC value of 98.16% and 92.08%, and an accuracy of 97.31% and 88.46%, respectively. The experimental result was comparable with related work performance. CONCLUSIONS: The best performing result obtained with embedded method is more parsimonious than the filter one. The SURF and MinEigen algorithms provide a strong informative content useful for the characterization of microcalcification clusters.
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spelling pubmed-70691582020-03-18 A machine learning approach on multiscale texture analysis for breast microcalcification diagnosis Fanizzi, Annarita Basile, Teresa M. A. Losurdo, Liliana Bellotti, Roberto Bottigli, Ubaldo Dentamaro, Rosalba Didonna, Vittorio Fausto, Alfonso Massafra, Raffaella Moschetta, Marco Popescu, Ondina Tamborra, Pasquale Tangaro, Sabina La Forgia, Daniele BMC Bioinformatics Research BACKGROUND: Screening programs use mammography as primary diagnostic tool for detecting breast cancer at an early stage. The diagnosis of some lesions, such as microcalcifications, is still difficult today for radiologists. In this paper, we proposed an automatic binary model for discriminating tissue in digital mammograms, as support tool for the radiologists. In particular, we compared the contribution of different methods on the feature selection process in terms of the learning performances and selected features. RESULTS: For each ROI, we extracted textural features on Haar wavelet decompositions and also interest points and corners detected by using Speeded Up Robust Feature (SURF) and Minimum Eigenvalue Algorithm (MinEigenAlg). Then a Random Forest binary classifier is trained on a subset of a sub-set features selected by two different kinds of feature selection techniques, such as filter and embedded methods. We tested the proposed model on 260 ROIs extracted from digital mammograms of the BCDR public database. The best prediction performance for the normal/abnormal and benign/malignant problems reaches a median AUC value of 98.16% and 92.08%, and an accuracy of 97.31% and 88.46%, respectively. The experimental result was comparable with related work performance. CONCLUSIONS: The best performing result obtained with embedded method is more parsimonious than the filter one. The SURF and MinEigen algorithms provide a strong informative content useful for the characterization of microcalcification clusters. BioMed Central 2020-03-11 /pmc/articles/PMC7069158/ /pubmed/32164532 http://dx.doi.org/10.1186/s12859-020-3358-4 Text en © The Author(s) 2020 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Fanizzi, Annarita
Basile, Teresa M. A.
Losurdo, Liliana
Bellotti, Roberto
Bottigli, Ubaldo
Dentamaro, Rosalba
Didonna, Vittorio
Fausto, Alfonso
Massafra, Raffaella
Moschetta, Marco
Popescu, Ondina
Tamborra, Pasquale
Tangaro, Sabina
La Forgia, Daniele
A machine learning approach on multiscale texture analysis for breast microcalcification diagnosis
title A machine learning approach on multiscale texture analysis for breast microcalcification diagnosis
title_full A machine learning approach on multiscale texture analysis for breast microcalcification diagnosis
title_fullStr A machine learning approach on multiscale texture analysis for breast microcalcification diagnosis
title_full_unstemmed A machine learning approach on multiscale texture analysis for breast microcalcification diagnosis
title_short A machine learning approach on multiscale texture analysis for breast microcalcification diagnosis
title_sort machine learning approach on multiscale texture analysis for breast microcalcification diagnosis
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7069158/
https://www.ncbi.nlm.nih.gov/pubmed/32164532
http://dx.doi.org/10.1186/s12859-020-3358-4
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