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The association between SMAD7 polymorphisms and colorectal cancer susceptibility as well as clinicopathological features in the Iranian population

AIM: Our aim was to investigate the association between two single nucleotide polymorphisms (SNPs) of SMAD7 and the risk of CRC among Iranian individuals. BACKGROUND: Genome-wide association studies (GWAS) have identified 18q21 as a risk locus for colorectal cancer (CRC), which maps to the SMAD7 gen...

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Autores principales: Akbari, Zahra, Safari-Alighiarloo, Nahid, Asadzadeh Aghdaei, Hamid, Vahedi, Mohsen, Montazer Haghighi, Mahdi, Matani Borkheili, Maryam, Nazemalhosseini-Mojarad, Ehsan, Zali, Mohammad Reza
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Shaheed Beheshti University of Medical Sciences 2020
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Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7069530/
https://www.ncbi.nlm.nih.gov/pubmed/32190221
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author Akbari, Zahra
Safari-Alighiarloo, Nahid
Asadzadeh Aghdaei, Hamid
Vahedi, Mohsen
Montazer Haghighi, Mahdi
Matani Borkheili, Maryam
Nazemalhosseini-Mojarad, Ehsan
Zali, Mohammad Reza
author_facet Akbari, Zahra
Safari-Alighiarloo, Nahid
Asadzadeh Aghdaei, Hamid
Vahedi, Mohsen
Montazer Haghighi, Mahdi
Matani Borkheili, Maryam
Nazemalhosseini-Mojarad, Ehsan
Zali, Mohammad Reza
author_sort Akbari, Zahra
collection PubMed
description AIM: Our aim was to investigate the association between two single nucleotide polymorphisms (SNPs) of SMAD7 and the risk of CRC among Iranian individuals. BACKGROUND: Genome-wide association studies (GWAS) have identified 18q21 as a risk locus for colorectal cancer (CRC), which maps to the SMAD7 gene. METHODS: This case–control study was conducted on 109 CRC cases and 109 controls in the Iranian population to evaluate the influence of two SNPs of SMAD7, rs2337106 and rs6507874, on the risk of CRC as well as on clinicopathological features. Genotype determination was performed by TaqMan assay via an ABI 7500 Real Time PCR System (Applied Biosystems) for the DNA of peripheral blood. Descriptive analysis and logistic regression model were used for statistical analyses. RESULTS: Genotyping of the SNPs in the SMAD7 gene revealed that the frequency of G allele of rs2337106 was 53.7% in controls and 56.4% in cases (p-value=0.564) while the frequency of C allele of rs6507874 was 55.5% in controls and 56.3% in cases (p-value=0.772). Further, there were no significant differences in genotype frequencies of these SNPs between CRC patients and controls. The SMAD7 genotypes were not associated with the risk of CRC or with any clinicopathological characteristics such as tumor site, tumor grade, and stage TNM in CRC patients (p-value>0.05), even after adjustment for sex, age, and smoking status. CONCLUSION: Our results provided the first evidence that SMAD7 genotypes, rs2337106 and rs6507874, could not be predisposing markers in genetic susceptibility to CRC in an Iranian population, at least in the studied population.
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spelling pubmed-70695302020-03-18 The association between SMAD7 polymorphisms and colorectal cancer susceptibility as well as clinicopathological features in the Iranian population Akbari, Zahra Safari-Alighiarloo, Nahid Asadzadeh Aghdaei, Hamid Vahedi, Mohsen Montazer Haghighi, Mahdi Matani Borkheili, Maryam Nazemalhosseini-Mojarad, Ehsan Zali, Mohammad Reza Gastroenterol Hepatol Bed Bench Original Article AIM: Our aim was to investigate the association between two single nucleotide polymorphisms (SNPs) of SMAD7 and the risk of CRC among Iranian individuals. BACKGROUND: Genome-wide association studies (GWAS) have identified 18q21 as a risk locus for colorectal cancer (CRC), which maps to the SMAD7 gene. METHODS: This case–control study was conducted on 109 CRC cases and 109 controls in the Iranian population to evaluate the influence of two SNPs of SMAD7, rs2337106 and rs6507874, on the risk of CRC as well as on clinicopathological features. Genotype determination was performed by TaqMan assay via an ABI 7500 Real Time PCR System (Applied Biosystems) for the DNA of peripheral blood. Descriptive analysis and logistic regression model were used for statistical analyses. RESULTS: Genotyping of the SNPs in the SMAD7 gene revealed that the frequency of G allele of rs2337106 was 53.7% in controls and 56.4% in cases (p-value=0.564) while the frequency of C allele of rs6507874 was 55.5% in controls and 56.3% in cases (p-value=0.772). Further, there were no significant differences in genotype frequencies of these SNPs between CRC patients and controls. The SMAD7 genotypes were not associated with the risk of CRC or with any clinicopathological characteristics such as tumor site, tumor grade, and stage TNM in CRC patients (p-value>0.05), even after adjustment for sex, age, and smoking status. CONCLUSION: Our results provided the first evidence that SMAD7 genotypes, rs2337106 and rs6507874, could not be predisposing markers in genetic susceptibility to CRC in an Iranian population, at least in the studied population. Shaheed Beheshti University of Medical Sciences 2020 /pmc/articles/PMC7069530/ /pubmed/32190221 Text en ©2020 RIGLD, Research Institute for Gastroenterology and Liver Diseases This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Akbari, Zahra
Safari-Alighiarloo, Nahid
Asadzadeh Aghdaei, Hamid
Vahedi, Mohsen
Montazer Haghighi, Mahdi
Matani Borkheili, Maryam
Nazemalhosseini-Mojarad, Ehsan
Zali, Mohammad Reza
The association between SMAD7 polymorphisms and colorectal cancer susceptibility as well as clinicopathological features in the Iranian population
title The association between SMAD7 polymorphisms and colorectal cancer susceptibility as well as clinicopathological features in the Iranian population
title_full The association between SMAD7 polymorphisms and colorectal cancer susceptibility as well as clinicopathological features in the Iranian population
title_fullStr The association between SMAD7 polymorphisms and colorectal cancer susceptibility as well as clinicopathological features in the Iranian population
title_full_unstemmed The association between SMAD7 polymorphisms and colorectal cancer susceptibility as well as clinicopathological features in the Iranian population
title_short The association between SMAD7 polymorphisms and colorectal cancer susceptibility as well as clinicopathological features in the Iranian population
title_sort association between smad7 polymorphisms and colorectal cancer susceptibility as well as clinicopathological features in the iranian population
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7069530/
https://www.ncbi.nlm.nih.gov/pubmed/32190221
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