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Towards a widespread adoption of metabolic modeling tools in biopharmaceutical industry: a process systems biology engineering perspective
In biotechnology, the emergence of high-throughput technologies challenges the interpretation of large datasets. One way to identify meaningful outcomes impacting process and product attributes from large datasets is using systems biology tools such as metabolic models. However, these tools are stil...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7070029/ https://www.ncbi.nlm.nih.gov/pubmed/32170148 http://dx.doi.org/10.1038/s41540-020-0127-y |
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author | Richelle, Anne David, Blandine Demaegd, Didier Dewerchin, Marianne Kinet, Romain Morreale, Angelo Portela, Rui Zune, Quentin von Stosch, Moritz |
author_facet | Richelle, Anne David, Blandine Demaegd, Didier Dewerchin, Marianne Kinet, Romain Morreale, Angelo Portela, Rui Zune, Quentin von Stosch, Moritz |
author_sort | Richelle, Anne |
collection | PubMed |
description | In biotechnology, the emergence of high-throughput technologies challenges the interpretation of large datasets. One way to identify meaningful outcomes impacting process and product attributes from large datasets is using systems biology tools such as metabolic models. However, these tools are still not fully exploited for this purpose in industrial context due to gaps in our knowledge and technical limitations. In this paper, key aspects restraining the routine implementation of these tools are highlighted in three research fields: monitoring, network science and hybrid modeling. Advances in these fields could expand the current state of systems biology applications in biopharmaceutical industry to address existing challenges in bioprocess development and improvement. |
format | Online Article Text |
id | pubmed-7070029 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70700292020-03-19 Towards a widespread adoption of metabolic modeling tools in biopharmaceutical industry: a process systems biology engineering perspective Richelle, Anne David, Blandine Demaegd, Didier Dewerchin, Marianne Kinet, Romain Morreale, Angelo Portela, Rui Zune, Quentin von Stosch, Moritz NPJ Syst Biol Appl Perspective In biotechnology, the emergence of high-throughput technologies challenges the interpretation of large datasets. One way to identify meaningful outcomes impacting process and product attributes from large datasets is using systems biology tools such as metabolic models. However, these tools are still not fully exploited for this purpose in industrial context due to gaps in our knowledge and technical limitations. In this paper, key aspects restraining the routine implementation of these tools are highlighted in three research fields: monitoring, network science and hybrid modeling. Advances in these fields could expand the current state of systems biology applications in biopharmaceutical industry to address existing challenges in bioprocess development and improvement. Nature Publishing Group UK 2020-03-13 /pmc/articles/PMC7070029/ /pubmed/32170148 http://dx.doi.org/10.1038/s41540-020-0127-y Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Perspective Richelle, Anne David, Blandine Demaegd, Didier Dewerchin, Marianne Kinet, Romain Morreale, Angelo Portela, Rui Zune, Quentin von Stosch, Moritz Towards a widespread adoption of metabolic modeling tools in biopharmaceutical industry: a process systems biology engineering perspective |
title | Towards a widespread adoption of metabolic modeling tools in biopharmaceutical industry: a process systems biology engineering perspective |
title_full | Towards a widespread adoption of metabolic modeling tools in biopharmaceutical industry: a process systems biology engineering perspective |
title_fullStr | Towards a widespread adoption of metabolic modeling tools in biopharmaceutical industry: a process systems biology engineering perspective |
title_full_unstemmed | Towards a widespread adoption of metabolic modeling tools in biopharmaceutical industry: a process systems biology engineering perspective |
title_short | Towards a widespread adoption of metabolic modeling tools in biopharmaceutical industry: a process systems biology engineering perspective |
title_sort | towards a widespread adoption of metabolic modeling tools in biopharmaceutical industry: a process systems biology engineering perspective |
topic | Perspective |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7070029/ https://www.ncbi.nlm.nih.gov/pubmed/32170148 http://dx.doi.org/10.1038/s41540-020-0127-y |
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