Cargando…

Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC

Non-uniform gray distribution and blurred edges often result in bias during the superpixel segmentation of medical images of magnetic resonance imaging (MRI). To this end, we propose a novel superpixel segmentation algorithm by integrating texture features and improved simple linear iterative cluste...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Yu, Qi, Qi, Shen, Xuanjing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7071465/
https://www.ncbi.nlm.nih.gov/pubmed/32093401
http://dx.doi.org/10.3390/brainsci10020116
_version_ 1783506208320126976
author Wang, Yu
Qi, Qi
Shen, Xuanjing
author_facet Wang, Yu
Qi, Qi
Shen, Xuanjing
author_sort Wang, Yu
collection PubMed
description Non-uniform gray distribution and blurred edges often result in bias during the superpixel segmentation of medical images of magnetic resonance imaging (MRI). To this end, we propose a novel superpixel segmentation algorithm by integrating texture features and improved simple linear iterative clustering (SLIC). First, a 3D histogram reconstruction model is used to reconstruct the input image, which is further enhanced by gamma transformation. Next, the local tri-directional pattern descriptor is used to extract texture features of the image; this is followed by an improved SLIC superpixel segmentation. Finally, a novel clustering-center updating rule is proposed, using pixels with gray difference with original clustering centers smaller than a predefined threshold. The experiments on the Whole Brain Atlas (WBA) image database showed that, compared to existing state-of-the-art methods, our superpixel segmentation algorithm generated significantly more uniform superpixels, and demonstrated the performance accuracy of the superpixel segmentation in both fuzzy boundaries and fuzzy regions.
format Online
Article
Text
id pubmed-7071465
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-70714652020-03-19 Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC Wang, Yu Qi, Qi Shen, Xuanjing Brain Sci Article Non-uniform gray distribution and blurred edges often result in bias during the superpixel segmentation of medical images of magnetic resonance imaging (MRI). To this end, we propose a novel superpixel segmentation algorithm by integrating texture features and improved simple linear iterative clustering (SLIC). First, a 3D histogram reconstruction model is used to reconstruct the input image, which is further enhanced by gamma transformation. Next, the local tri-directional pattern descriptor is used to extract texture features of the image; this is followed by an improved SLIC superpixel segmentation. Finally, a novel clustering-center updating rule is proposed, using pixels with gray difference with original clustering centers smaller than a predefined threshold. The experiments on the Whole Brain Atlas (WBA) image database showed that, compared to existing state-of-the-art methods, our superpixel segmentation algorithm generated significantly more uniform superpixels, and demonstrated the performance accuracy of the superpixel segmentation in both fuzzy boundaries and fuzzy regions. MDPI 2020-02-20 /pmc/articles/PMC7071465/ /pubmed/32093401 http://dx.doi.org/10.3390/brainsci10020116 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wang, Yu
Qi, Qi
Shen, Xuanjing
Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC
title Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC
title_full Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC
title_fullStr Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC
title_full_unstemmed Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC
title_short Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC
title_sort image segmentation of brain mri based on ltridp and superpixels of improved slic
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7071465/
https://www.ncbi.nlm.nih.gov/pubmed/32093401
http://dx.doi.org/10.3390/brainsci10020116
work_keys_str_mv AT wangyu imagesegmentationofbrainmribasedonltridpandsuperpixelsofimprovedslic
AT qiqi imagesegmentationofbrainmribasedonltridpandsuperpixelsofimprovedslic
AT shenxuanjing imagesegmentationofbrainmribasedonltridpandsuperpixelsofimprovedslic