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Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC
Non-uniform gray distribution and blurred edges often result in bias during the superpixel segmentation of medical images of magnetic resonance imaging (MRI). To this end, we propose a novel superpixel segmentation algorithm by integrating texture features and improved simple linear iterative cluste...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7071465/ https://www.ncbi.nlm.nih.gov/pubmed/32093401 http://dx.doi.org/10.3390/brainsci10020116 |
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author | Wang, Yu Qi, Qi Shen, Xuanjing |
author_facet | Wang, Yu Qi, Qi Shen, Xuanjing |
author_sort | Wang, Yu |
collection | PubMed |
description | Non-uniform gray distribution and blurred edges often result in bias during the superpixel segmentation of medical images of magnetic resonance imaging (MRI). To this end, we propose a novel superpixel segmentation algorithm by integrating texture features and improved simple linear iterative clustering (SLIC). First, a 3D histogram reconstruction model is used to reconstruct the input image, which is further enhanced by gamma transformation. Next, the local tri-directional pattern descriptor is used to extract texture features of the image; this is followed by an improved SLIC superpixel segmentation. Finally, a novel clustering-center updating rule is proposed, using pixels with gray difference with original clustering centers smaller than a predefined threshold. The experiments on the Whole Brain Atlas (WBA) image database showed that, compared to existing state-of-the-art methods, our superpixel segmentation algorithm generated significantly more uniform superpixels, and demonstrated the performance accuracy of the superpixel segmentation in both fuzzy boundaries and fuzzy regions. |
format | Online Article Text |
id | pubmed-7071465 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-70714652020-03-19 Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC Wang, Yu Qi, Qi Shen, Xuanjing Brain Sci Article Non-uniform gray distribution and blurred edges often result in bias during the superpixel segmentation of medical images of magnetic resonance imaging (MRI). To this end, we propose a novel superpixel segmentation algorithm by integrating texture features and improved simple linear iterative clustering (SLIC). First, a 3D histogram reconstruction model is used to reconstruct the input image, which is further enhanced by gamma transformation. Next, the local tri-directional pattern descriptor is used to extract texture features of the image; this is followed by an improved SLIC superpixel segmentation. Finally, a novel clustering-center updating rule is proposed, using pixels with gray difference with original clustering centers smaller than a predefined threshold. The experiments on the Whole Brain Atlas (WBA) image database showed that, compared to existing state-of-the-art methods, our superpixel segmentation algorithm generated significantly more uniform superpixels, and demonstrated the performance accuracy of the superpixel segmentation in both fuzzy boundaries and fuzzy regions. MDPI 2020-02-20 /pmc/articles/PMC7071465/ /pubmed/32093401 http://dx.doi.org/10.3390/brainsci10020116 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Wang, Yu Qi, Qi Shen, Xuanjing Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC |
title | Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC |
title_full | Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC |
title_fullStr | Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC |
title_full_unstemmed | Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC |
title_short | Image Segmentation of Brain MRI Based on LTriDP and Superpixels of Improved SLIC |
title_sort | image segmentation of brain mri based on ltridp and superpixels of improved slic |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7071465/ https://www.ncbi.nlm.nih.gov/pubmed/32093401 http://dx.doi.org/10.3390/brainsci10020116 |
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