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Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source

BACKGROUND: Over the last years oleaginous yeasts have been studied for several energetic, oleochemical, medical and pharmaceutical purposes. However, only a small number of yeasts are known and have been deeply exploited. The search for new isolates with high oleaginous capacity becomes imperative,...

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Autores principales: Miranda, Catarina, Bettencourt, Sara, Pozdniakova, Tatiana, Pereira, Joana, Sampaio, Paula, Franco-Duarte, Ricardo, Pais, Célia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7071767/
https://www.ncbi.nlm.nih.gov/pubmed/32169040
http://dx.doi.org/10.1186/s12866-020-01742-6
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author Miranda, Catarina
Bettencourt, Sara
Pozdniakova, Tatiana
Pereira, Joana
Sampaio, Paula
Franco-Duarte, Ricardo
Pais, Célia
author_facet Miranda, Catarina
Bettencourt, Sara
Pozdniakova, Tatiana
Pereira, Joana
Sampaio, Paula
Franco-Duarte, Ricardo
Pais, Célia
author_sort Miranda, Catarina
collection PubMed
description BACKGROUND: Over the last years oleaginous yeasts have been studied for several energetic, oleochemical, medical and pharmaceutical purposes. However, only a small number of yeasts are known and have been deeply exploited. The search for new isolates with high oleaginous capacity becomes imperative, as well as the use of alternative and ecological carbon sources for yeast growth. RESULTS: In the present study a high-throughput screening comprising 366 distinct yeast isolates was performed by applying an optimised protocol based on two approaches: (I) yeast cultivation on solid medium using acetic acid as carbon source, (II) neutral lipid estimation by fluorimetry using the lipophilic dye Nile red. CONCLUSIONS: Results showed that, with the proposed methodology, the oleaginous potential of yeasts with broad taxonomic diversity and variety of growth characteristics was discriminated. Furthermore, this work clearly demonstrated the association of the oleaginous yeast character to the strain level, contrarily to the species-level linkage, as usually stated.
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spelling pubmed-70717672020-03-18 Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source Miranda, Catarina Bettencourt, Sara Pozdniakova, Tatiana Pereira, Joana Sampaio, Paula Franco-Duarte, Ricardo Pais, Célia BMC Microbiol Research Article BACKGROUND: Over the last years oleaginous yeasts have been studied for several energetic, oleochemical, medical and pharmaceutical purposes. However, only a small number of yeasts are known and have been deeply exploited. The search for new isolates with high oleaginous capacity becomes imperative, as well as the use of alternative and ecological carbon sources for yeast growth. RESULTS: In the present study a high-throughput screening comprising 366 distinct yeast isolates was performed by applying an optimised protocol based on two approaches: (I) yeast cultivation on solid medium using acetic acid as carbon source, (II) neutral lipid estimation by fluorimetry using the lipophilic dye Nile red. CONCLUSIONS: Results showed that, with the proposed methodology, the oleaginous potential of yeasts with broad taxonomic diversity and variety of growth characteristics was discriminated. Furthermore, this work clearly demonstrated the association of the oleaginous yeast character to the strain level, contrarily to the species-level linkage, as usually stated. BioMed Central 2020-03-14 /pmc/articles/PMC7071767/ /pubmed/32169040 http://dx.doi.org/10.1186/s12866-020-01742-6 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Miranda, Catarina
Bettencourt, Sara
Pozdniakova, Tatiana
Pereira, Joana
Sampaio, Paula
Franco-Duarte, Ricardo
Pais, Célia
Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source
title Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source
title_full Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source
title_fullStr Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source
title_full_unstemmed Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source
title_short Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source
title_sort modified high-throughput nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7071767/
https://www.ncbi.nlm.nih.gov/pubmed/32169040
http://dx.doi.org/10.1186/s12866-020-01742-6
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