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PIK3R1(W624R) Is an Actionable Mutation in High Grade Serous Ovarian Carcinoma

Identifying cancer drivers and actionable mutations is critical for precision oncology. In epithelial ovarian cancer (EOC) the majority of mutations lack biological or clinical validation. We fully characterized 43 lines of Patient-Derived Xenografts (PDXs) and performed copy number analysis and who...

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Autores principales: D’Ambrosio, Concetta, Erriquez, Jessica, Arigoni, Maddalena, Capellero, Sonia, Mittica, Gloria, Ghisoni, Eleonora, Borella, Fulvio, Katsaros, Dionyssios, Privitera, Silvana, Ribotta, Marisa, Maldi, Elena, Di Nardo, Giovanna, Berrino, Enrico, Venesio, Tiziana, Ponzone, Riccardo, Vaira, Marco, Hall, Douglas, Jimenez-Linan, Mercedes, Paterson, Anna L., Calogero, Raffaele A., Brenton, James D., Valabrega, Giorgio, Di Renzo, Maria Flavia, Olivero, Martina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7072782/
https://www.ncbi.nlm.nih.gov/pubmed/32075097
http://dx.doi.org/10.3390/cells9020442
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author D’Ambrosio, Concetta
Erriquez, Jessica
Arigoni, Maddalena
Capellero, Sonia
Mittica, Gloria
Ghisoni, Eleonora
Borella, Fulvio
Katsaros, Dionyssios
Privitera, Silvana
Ribotta, Marisa
Maldi, Elena
Di Nardo, Giovanna
Berrino, Enrico
Venesio, Tiziana
Ponzone, Riccardo
Vaira, Marco
Hall, Douglas
Jimenez-Linan, Mercedes
Paterson, Anna L.
Calogero, Raffaele A.
Brenton, James D.
Valabrega, Giorgio
Di Renzo, Maria Flavia
Olivero, Martina
author_facet D’Ambrosio, Concetta
Erriquez, Jessica
Arigoni, Maddalena
Capellero, Sonia
Mittica, Gloria
Ghisoni, Eleonora
Borella, Fulvio
Katsaros, Dionyssios
Privitera, Silvana
Ribotta, Marisa
Maldi, Elena
Di Nardo, Giovanna
Berrino, Enrico
Venesio, Tiziana
Ponzone, Riccardo
Vaira, Marco
Hall, Douglas
Jimenez-Linan, Mercedes
Paterson, Anna L.
Calogero, Raffaele A.
Brenton, James D.
Valabrega, Giorgio
Di Renzo, Maria Flavia
Olivero, Martina
author_sort D’Ambrosio, Concetta
collection PubMed
description Identifying cancer drivers and actionable mutations is critical for precision oncology. In epithelial ovarian cancer (EOC) the majority of mutations lack biological or clinical validation. We fully characterized 43 lines of Patient-Derived Xenografts (PDXs) and performed copy number analysis and whole exome sequencing of 12 lines derived from naïve, high grade EOCs. Pyrosequencing allowed quantifying mutations in the source tumours. Drug response was assayed on PDX Derived Tumour Cells (PDTCs) and in vivo on PDXs. We identified a PIK3R1(W624R) variant in PDXs from a high grade serous EOC. Allele frequencies of PIK3R1(W624R) in all the passaged PDXs and in samples of the source tumour suggested that it was truncal and thus possibly a driver mutation. After inconclusive results in silico analyses, PDTCs and PDXs allowed the showing actionability of PIK3R1(W624R) and addiction of PIK3R1(W624R) carrying cells to inhibitors of the PI3K/AKT/mTOR pathway. It is noteworthy that PIK3R1 encodes the p85α regulatory subunit of PI3K, that is very rarely mutated in EOC. The PIK3R1(W624R) mutation is located in the cSH2 domain of the p85α that has never been involved in oncogenesis. These data show that patient-derived models are irreplaceable in their role of unveiling unpredicted driver and actionable variants in advanced ovarian cancer.
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spelling pubmed-70727822020-03-19 PIK3R1(W624R) Is an Actionable Mutation in High Grade Serous Ovarian Carcinoma D’Ambrosio, Concetta Erriquez, Jessica Arigoni, Maddalena Capellero, Sonia Mittica, Gloria Ghisoni, Eleonora Borella, Fulvio Katsaros, Dionyssios Privitera, Silvana Ribotta, Marisa Maldi, Elena Di Nardo, Giovanna Berrino, Enrico Venesio, Tiziana Ponzone, Riccardo Vaira, Marco Hall, Douglas Jimenez-Linan, Mercedes Paterson, Anna L. Calogero, Raffaele A. Brenton, James D. Valabrega, Giorgio Di Renzo, Maria Flavia Olivero, Martina Cells Article Identifying cancer drivers and actionable mutations is critical for precision oncology. In epithelial ovarian cancer (EOC) the majority of mutations lack biological or clinical validation. We fully characterized 43 lines of Patient-Derived Xenografts (PDXs) and performed copy number analysis and whole exome sequencing of 12 lines derived from naïve, high grade EOCs. Pyrosequencing allowed quantifying mutations in the source tumours. Drug response was assayed on PDX Derived Tumour Cells (PDTCs) and in vivo on PDXs. We identified a PIK3R1(W624R) variant in PDXs from a high grade serous EOC. Allele frequencies of PIK3R1(W624R) in all the passaged PDXs and in samples of the source tumour suggested that it was truncal and thus possibly a driver mutation. After inconclusive results in silico analyses, PDTCs and PDXs allowed the showing actionability of PIK3R1(W624R) and addiction of PIK3R1(W624R) carrying cells to inhibitors of the PI3K/AKT/mTOR pathway. It is noteworthy that PIK3R1 encodes the p85α regulatory subunit of PI3K, that is very rarely mutated in EOC. The PIK3R1(W624R) mutation is located in the cSH2 domain of the p85α that has never been involved in oncogenesis. These data show that patient-derived models are irreplaceable in their role of unveiling unpredicted driver and actionable variants in advanced ovarian cancer. MDPI 2020-02-14 /pmc/articles/PMC7072782/ /pubmed/32075097 http://dx.doi.org/10.3390/cells9020442 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
D’Ambrosio, Concetta
Erriquez, Jessica
Arigoni, Maddalena
Capellero, Sonia
Mittica, Gloria
Ghisoni, Eleonora
Borella, Fulvio
Katsaros, Dionyssios
Privitera, Silvana
Ribotta, Marisa
Maldi, Elena
Di Nardo, Giovanna
Berrino, Enrico
Venesio, Tiziana
Ponzone, Riccardo
Vaira, Marco
Hall, Douglas
Jimenez-Linan, Mercedes
Paterson, Anna L.
Calogero, Raffaele A.
Brenton, James D.
Valabrega, Giorgio
Di Renzo, Maria Flavia
Olivero, Martina
PIK3R1(W624R) Is an Actionable Mutation in High Grade Serous Ovarian Carcinoma
title PIK3R1(W624R) Is an Actionable Mutation in High Grade Serous Ovarian Carcinoma
title_full PIK3R1(W624R) Is an Actionable Mutation in High Grade Serous Ovarian Carcinoma
title_fullStr PIK3R1(W624R) Is an Actionable Mutation in High Grade Serous Ovarian Carcinoma
title_full_unstemmed PIK3R1(W624R) Is an Actionable Mutation in High Grade Serous Ovarian Carcinoma
title_short PIK3R1(W624R) Is an Actionable Mutation in High Grade Serous Ovarian Carcinoma
title_sort pik3r1(w624r) is an actionable mutation in high grade serous ovarian carcinoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7072782/
https://www.ncbi.nlm.nih.gov/pubmed/32075097
http://dx.doi.org/10.3390/cells9020442
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