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Biosynthesis of Saxitoxin in Marine Dinoflagellates: An Omics Perspective
Saxitoxin is an alkaloid neurotoxin originally isolated from the clam Saxidomus giganteus in 1957. This group of neurotoxins is produced by several species of freshwater cyanobacteria and marine dinoflagellates. The saxitoxin biosynthesis pathway was described for the first time in the 1980s and, si...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7073992/ https://www.ncbi.nlm.nih.gov/pubmed/32033403 http://dx.doi.org/10.3390/md18020103 |
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author | Akbar, Muhamad Afiq Mohd Yusof, Nurul Yuziana Tahir, Noor Idayu Ahmad, Asmat Usup, Gires Sahrani, Fathul Karim Bunawan, Hamidun |
author_facet | Akbar, Muhamad Afiq Mohd Yusof, Nurul Yuziana Tahir, Noor Idayu Ahmad, Asmat Usup, Gires Sahrani, Fathul Karim Bunawan, Hamidun |
author_sort | Akbar, Muhamad Afiq |
collection | PubMed |
description | Saxitoxin is an alkaloid neurotoxin originally isolated from the clam Saxidomus giganteus in 1957. This group of neurotoxins is produced by several species of freshwater cyanobacteria and marine dinoflagellates. The saxitoxin biosynthesis pathway was described for the first time in the 1980s and, since then, it was studied in more than seven cyanobacterial genera, comprising 26 genes that form a cluster ranging from 25.7 kb to 35 kb in sequence length. Due to the complexity of the genomic landscape, saxitoxin biosynthesis in dinoflagellates remains unknown. In order to reveal and understand the dynamics of the activity in such impressive unicellular organisms with a complex genome, a strategy that can carefully engage them in a systems view is necessary. Advances in omics technology (the collective tools of biological sciences) facilitated high-throughput studies of the genome, transcriptome, proteome, and metabolome of dinoflagellates. The omics approach was utilized to address saxitoxin-producing dinoflagellates in response to environmental stresses to improve understanding of dinoflagellates gene–environment interactions. Therefore, in this review, the progress in understanding dinoflagellate saxitoxin biosynthesis using an omics approach is emphasized. Further potential applications of metabolomics and genomics to unravel novel insights into saxitoxin biosynthesis in dinoflagellates are also reviewed. |
format | Online Article Text |
id | pubmed-7073992 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-70739922020-03-19 Biosynthesis of Saxitoxin in Marine Dinoflagellates: An Omics Perspective Akbar, Muhamad Afiq Mohd Yusof, Nurul Yuziana Tahir, Noor Idayu Ahmad, Asmat Usup, Gires Sahrani, Fathul Karim Bunawan, Hamidun Mar Drugs Review Saxitoxin is an alkaloid neurotoxin originally isolated from the clam Saxidomus giganteus in 1957. This group of neurotoxins is produced by several species of freshwater cyanobacteria and marine dinoflagellates. The saxitoxin biosynthesis pathway was described for the first time in the 1980s and, since then, it was studied in more than seven cyanobacterial genera, comprising 26 genes that form a cluster ranging from 25.7 kb to 35 kb in sequence length. Due to the complexity of the genomic landscape, saxitoxin biosynthesis in dinoflagellates remains unknown. In order to reveal and understand the dynamics of the activity in such impressive unicellular organisms with a complex genome, a strategy that can carefully engage them in a systems view is necessary. Advances in omics technology (the collective tools of biological sciences) facilitated high-throughput studies of the genome, transcriptome, proteome, and metabolome of dinoflagellates. The omics approach was utilized to address saxitoxin-producing dinoflagellates in response to environmental stresses to improve understanding of dinoflagellates gene–environment interactions. Therefore, in this review, the progress in understanding dinoflagellate saxitoxin biosynthesis using an omics approach is emphasized. Further potential applications of metabolomics and genomics to unravel novel insights into saxitoxin biosynthesis in dinoflagellates are also reviewed. MDPI 2020-02-05 /pmc/articles/PMC7073992/ /pubmed/32033403 http://dx.doi.org/10.3390/md18020103 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Akbar, Muhamad Afiq Mohd Yusof, Nurul Yuziana Tahir, Noor Idayu Ahmad, Asmat Usup, Gires Sahrani, Fathul Karim Bunawan, Hamidun Biosynthesis of Saxitoxin in Marine Dinoflagellates: An Omics Perspective |
title | Biosynthesis of Saxitoxin in Marine Dinoflagellates: An Omics Perspective |
title_full | Biosynthesis of Saxitoxin in Marine Dinoflagellates: An Omics Perspective |
title_fullStr | Biosynthesis of Saxitoxin in Marine Dinoflagellates: An Omics Perspective |
title_full_unstemmed | Biosynthesis of Saxitoxin in Marine Dinoflagellates: An Omics Perspective |
title_short | Biosynthesis of Saxitoxin in Marine Dinoflagellates: An Omics Perspective |
title_sort | biosynthesis of saxitoxin in marine dinoflagellates: an omics perspective |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7073992/ https://www.ncbi.nlm.nih.gov/pubmed/32033403 http://dx.doi.org/10.3390/md18020103 |
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