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Pollution Gradients Altered the Bacterial Community Composition and Stochastic Process of Rural Polluted Ponds
Understanding the effects of pollution on ecological communities and the underlying mechanisms that drive them will helpful for selecting a method to mediate polluted ecosystems. Quantifying the relative importance of deterministic and stochastic processes is a very important issue in ecology. Howev...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7074964/ https://www.ncbi.nlm.nih.gov/pubmed/32102406 http://dx.doi.org/10.3390/microorganisms8020311 |
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author | Tai, Xin Li, Rui Zhang, Bao Yu, Hao Kong, Xiao Bai, Zhihui Deng, Ye Jia, Lan Jin, Decai |
author_facet | Tai, Xin Li, Rui Zhang, Bao Yu, Hao Kong, Xiao Bai, Zhihui Deng, Ye Jia, Lan Jin, Decai |
author_sort | Tai, Xin |
collection | PubMed |
description | Understanding the effects of pollution on ecological communities and the underlying mechanisms that drive them will helpful for selecting a method to mediate polluted ecosystems. Quantifying the relative importance of deterministic and stochastic processes is a very important issue in ecology. However, little is known about their effects on the succession of microbial communities in different pollution levels rural ponds. Also, the processes that govern bacterial communities in polluted ponds are poorly understood. In this study, the microbial communities in water and sediment from the ponds were investigated by using the 16S rRNA gene high-throughput sequencing technology. Meanwhile, we used null model analyses based on a taxonomic and phylogenetic metrics approach to test the microbial community assembly processes. Pollution levels were found to significantly alter the community composition and diversity of bacteria. In the sediment samples, the bacterial diversity indices decreased with increasing pollutant levels. Between-community analysis revealed that community assembly processes among water and sediment samples stochastic ratio both gradually decreased with the increased pollution levels, indicating a potential deterministic environmental filtering that is elicited by pollution. Our results identified assemblage drivers of bacterial community is important for improving the efficacies of ecological evaluation and remediation for contaminated freshwater systems. |
format | Online Article Text |
id | pubmed-7074964 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-70749642020-03-20 Pollution Gradients Altered the Bacterial Community Composition and Stochastic Process of Rural Polluted Ponds Tai, Xin Li, Rui Zhang, Bao Yu, Hao Kong, Xiao Bai, Zhihui Deng, Ye Jia, Lan Jin, Decai Microorganisms Article Understanding the effects of pollution on ecological communities and the underlying mechanisms that drive them will helpful for selecting a method to mediate polluted ecosystems. Quantifying the relative importance of deterministic and stochastic processes is a very important issue in ecology. However, little is known about their effects on the succession of microbial communities in different pollution levels rural ponds. Also, the processes that govern bacterial communities in polluted ponds are poorly understood. In this study, the microbial communities in water and sediment from the ponds were investigated by using the 16S rRNA gene high-throughput sequencing technology. Meanwhile, we used null model analyses based on a taxonomic and phylogenetic metrics approach to test the microbial community assembly processes. Pollution levels were found to significantly alter the community composition and diversity of bacteria. In the sediment samples, the bacterial diversity indices decreased with increasing pollutant levels. Between-community analysis revealed that community assembly processes among water and sediment samples stochastic ratio both gradually decreased with the increased pollution levels, indicating a potential deterministic environmental filtering that is elicited by pollution. Our results identified assemblage drivers of bacterial community is important for improving the efficacies of ecological evaluation and remediation for contaminated freshwater systems. MDPI 2020-02-24 /pmc/articles/PMC7074964/ /pubmed/32102406 http://dx.doi.org/10.3390/microorganisms8020311 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Tai, Xin Li, Rui Zhang, Bao Yu, Hao Kong, Xiao Bai, Zhihui Deng, Ye Jia, Lan Jin, Decai Pollution Gradients Altered the Bacterial Community Composition and Stochastic Process of Rural Polluted Ponds |
title | Pollution Gradients Altered the Bacterial Community Composition and Stochastic Process of Rural Polluted Ponds |
title_full | Pollution Gradients Altered the Bacterial Community Composition and Stochastic Process of Rural Polluted Ponds |
title_fullStr | Pollution Gradients Altered the Bacterial Community Composition and Stochastic Process of Rural Polluted Ponds |
title_full_unstemmed | Pollution Gradients Altered the Bacterial Community Composition and Stochastic Process of Rural Polluted Ponds |
title_short | Pollution Gradients Altered the Bacterial Community Composition and Stochastic Process of Rural Polluted Ponds |
title_sort | pollution gradients altered the bacterial community composition and stochastic process of rural polluted ponds |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7074964/ https://www.ncbi.nlm.nih.gov/pubmed/32102406 http://dx.doi.org/10.3390/microorganisms8020311 |
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