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Transcriptome-Wide Identification, Evolutionary Analysis, and GA Stress Response of the GRAS Gene Family in Panax ginseng C. A. Meyer

GRAS transcription factors are a kind of plant-specific transcription factor that have been found in a variety of plants. According to previous studies, GRAS proteins are widely involved in the physiological processes of plant signal transduction, stress, growth and development. The Jilin ginseng (P...

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Autores principales: Wang, Nan, Wang, Kangyu, Li, Shaokun, Jiang, Yang, Li, Li, Zhao, Mingzhu, Jiang, Yue, Zhu, Lei, Wang, Yanfang, Su, Yingjie, Wang, Yi, Zhang, Meiping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7076401/
https://www.ncbi.nlm.nih.gov/pubmed/32033157
http://dx.doi.org/10.3390/plants9020190
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author Wang, Nan
Wang, Kangyu
Li, Shaokun
Jiang, Yang
Li, Li
Zhao, Mingzhu
Jiang, Yue
Zhu, Lei
Wang, Yanfang
Su, Yingjie
Wang, Yi
Zhang, Meiping
author_facet Wang, Nan
Wang, Kangyu
Li, Shaokun
Jiang, Yang
Li, Li
Zhao, Mingzhu
Jiang, Yue
Zhu, Lei
Wang, Yanfang
Su, Yingjie
Wang, Yi
Zhang, Meiping
author_sort Wang, Nan
collection PubMed
description GRAS transcription factors are a kind of plant-specific transcription factor that have been found in a variety of plants. According to previous studies, GRAS proteins are widely involved in the physiological processes of plant signal transduction, stress, growth and development. The Jilin ginseng (Panax ginseng C.A. Meyer) is a heterogeneous tetraploid perennial herb of the Araliaceae family, ginseng genus. Important information regarding the GRAS transcription factors has not been reported in ginseng. In this study, 59 Panax ginseng GRAS (PgGRAS) genes were obtained from the Jilin ginseng transcriptome data and divided into 13 sub-families according to the classification of Arabidopsis thaliana. Through systematic evolution, structural variation, function and gene expression analysis, we further reveal GRAS’s potential function in plant growth processes and its stress response. The expression of PgGRAS genes responding to gibberellin acids (GAs) suggests that these genes could be activated after application concentration of GA. The qPCR analysis result shows that four PgGRAS genes belonging to the DELLA sub-family potentially have important roles in the GA stress response of ginseng hairy roots. This study provides not only a preliminary exploration of the potential functions of the GRAS genes in ginseng, but also valuable data for further exploration of the candidate PgGRAS genes of GA signaling in Jilin ginseng, especially their roles in ginseng hairy root development and GA stress response.
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spelling pubmed-70764012020-03-24 Transcriptome-Wide Identification, Evolutionary Analysis, and GA Stress Response of the GRAS Gene Family in Panax ginseng C. A. Meyer Wang, Nan Wang, Kangyu Li, Shaokun Jiang, Yang Li, Li Zhao, Mingzhu Jiang, Yue Zhu, Lei Wang, Yanfang Su, Yingjie Wang, Yi Zhang, Meiping Plants (Basel) Article GRAS transcription factors are a kind of plant-specific transcription factor that have been found in a variety of plants. According to previous studies, GRAS proteins are widely involved in the physiological processes of plant signal transduction, stress, growth and development. The Jilin ginseng (Panax ginseng C.A. Meyer) is a heterogeneous tetraploid perennial herb of the Araliaceae family, ginseng genus. Important information regarding the GRAS transcription factors has not been reported in ginseng. In this study, 59 Panax ginseng GRAS (PgGRAS) genes were obtained from the Jilin ginseng transcriptome data and divided into 13 sub-families according to the classification of Arabidopsis thaliana. Through systematic evolution, structural variation, function and gene expression analysis, we further reveal GRAS’s potential function in plant growth processes and its stress response. The expression of PgGRAS genes responding to gibberellin acids (GAs) suggests that these genes could be activated after application concentration of GA. The qPCR analysis result shows that four PgGRAS genes belonging to the DELLA sub-family potentially have important roles in the GA stress response of ginseng hairy roots. This study provides not only a preliminary exploration of the potential functions of the GRAS genes in ginseng, but also valuable data for further exploration of the candidate PgGRAS genes of GA signaling in Jilin ginseng, especially their roles in ginseng hairy root development and GA stress response. MDPI 2020-02-04 /pmc/articles/PMC7076401/ /pubmed/32033157 http://dx.doi.org/10.3390/plants9020190 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wang, Nan
Wang, Kangyu
Li, Shaokun
Jiang, Yang
Li, Li
Zhao, Mingzhu
Jiang, Yue
Zhu, Lei
Wang, Yanfang
Su, Yingjie
Wang, Yi
Zhang, Meiping
Transcriptome-Wide Identification, Evolutionary Analysis, and GA Stress Response of the GRAS Gene Family in Panax ginseng C. A. Meyer
title Transcriptome-Wide Identification, Evolutionary Analysis, and GA Stress Response of the GRAS Gene Family in Panax ginseng C. A. Meyer
title_full Transcriptome-Wide Identification, Evolutionary Analysis, and GA Stress Response of the GRAS Gene Family in Panax ginseng C. A. Meyer
title_fullStr Transcriptome-Wide Identification, Evolutionary Analysis, and GA Stress Response of the GRAS Gene Family in Panax ginseng C. A. Meyer
title_full_unstemmed Transcriptome-Wide Identification, Evolutionary Analysis, and GA Stress Response of the GRAS Gene Family in Panax ginseng C. A. Meyer
title_short Transcriptome-Wide Identification, Evolutionary Analysis, and GA Stress Response of the GRAS Gene Family in Panax ginseng C. A. Meyer
title_sort transcriptome-wide identification, evolutionary analysis, and ga stress response of the gras gene family in panax ginseng c. a. meyer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7076401/
https://www.ncbi.nlm.nih.gov/pubmed/32033157
http://dx.doi.org/10.3390/plants9020190
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