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Performance of Coarse Graining in Estimating Polymer Properties: Comparison with the Atomistic Model
Combining atomistic and coarse-grained (CG) models is a promising approach for quantitative prediction of polymer properties. However, the gaps between the length and time scales of atomistic and CG models still need to be bridged. Here, the scale gaps of the atomistic model of polyethylene melts, t...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7077424/ https://www.ncbi.nlm.nih.gov/pubmed/32046337 http://dx.doi.org/10.3390/polym12020382 |
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author | Miwatani, Ryota Takahashi, Kazuaki Z. Arai, Noriyoshi |
author_facet | Miwatani, Ryota Takahashi, Kazuaki Z. Arai, Noriyoshi |
author_sort | Miwatani, Ryota |
collection | PubMed |
description | Combining atomistic and coarse-grained (CG) models is a promising approach for quantitative prediction of polymer properties. However, the gaps between the length and time scales of atomistic and CG models still need to be bridged. Here, the scale gaps of the atomistic model of polyethylene melts, the bead–spring Kremer–Grest model, and dissipative particle dynamics with the slip-spring model were investigated. A single set of spatial and temporal scaling factors was determined between the atomistic model and each CG model. The results of the CG models were rescaled using the set of scaling factors and compared with those of the atomistic model. For each polymer property, a threshold value indicating the onset of static or dynamic universality of polymers was obtained. The scaling factors also revealed the computational efficiency of each CG model with respect to the atomistic model. The performance of the CG models of polymers was systematically evaluated in terms of both the accuracy and computational efficiency. |
format | Online Article Text |
id | pubmed-7077424 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-70774242020-03-20 Performance of Coarse Graining in Estimating Polymer Properties: Comparison with the Atomistic Model Miwatani, Ryota Takahashi, Kazuaki Z. Arai, Noriyoshi Polymers (Basel) Article Combining atomistic and coarse-grained (CG) models is a promising approach for quantitative prediction of polymer properties. However, the gaps between the length and time scales of atomistic and CG models still need to be bridged. Here, the scale gaps of the atomistic model of polyethylene melts, the bead–spring Kremer–Grest model, and dissipative particle dynamics with the slip-spring model were investigated. A single set of spatial and temporal scaling factors was determined between the atomistic model and each CG model. The results of the CG models were rescaled using the set of scaling factors and compared with those of the atomistic model. For each polymer property, a threshold value indicating the onset of static or dynamic universality of polymers was obtained. The scaling factors also revealed the computational efficiency of each CG model with respect to the atomistic model. The performance of the CG models of polymers was systematically evaluated in terms of both the accuracy and computational efficiency. MDPI 2020-02-08 /pmc/articles/PMC7077424/ /pubmed/32046337 http://dx.doi.org/10.3390/polym12020382 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Miwatani, Ryota Takahashi, Kazuaki Z. Arai, Noriyoshi Performance of Coarse Graining in Estimating Polymer Properties: Comparison with the Atomistic Model |
title | Performance of Coarse Graining in Estimating Polymer Properties: Comparison with the Atomistic Model |
title_full | Performance of Coarse Graining in Estimating Polymer Properties: Comparison with the Atomistic Model |
title_fullStr | Performance of Coarse Graining in Estimating Polymer Properties: Comparison with the Atomistic Model |
title_full_unstemmed | Performance of Coarse Graining in Estimating Polymer Properties: Comparison with the Atomistic Model |
title_short | Performance of Coarse Graining in Estimating Polymer Properties: Comparison with the Atomistic Model |
title_sort | performance of coarse graining in estimating polymer properties: comparison with the atomistic model |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7077424/ https://www.ncbi.nlm.nih.gov/pubmed/32046337 http://dx.doi.org/10.3390/polym12020382 |
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