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Reverse Transcription Loop-Mediated Isothermal Amplification for Rapid Detection of Transmissible Gastroenteritis Virus
Transmissible gastroenteritis virus (TGEV) is the causative agent of porcine transmissible gastroenteritis, and sensitive detection methods are required for preventing the disease. In this article, reverse transcription-loop-mediated isothermal amplification (RT-LAMP) was developed to detect TGEV. T...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer-Verlag
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7080135/ https://www.ncbi.nlm.nih.gov/pubmed/21127872 http://dx.doi.org/10.1007/s00284-010-9825-9 |
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author | Li, Pengchong Ren, Xiaofeng |
author_facet | Li, Pengchong Ren, Xiaofeng |
author_sort | Li, Pengchong |
collection | PubMed |
description | Transmissible gastroenteritis virus (TGEV) is the causative agent of porcine transmissible gastroenteritis, and sensitive detection methods are required for preventing the disease. In this article, reverse transcription-loop-mediated isothermal amplification (RT-LAMP) was developed to detect TGEV. Three pairs of primers targeting the nucleocapsid (N) gene of TGEV were synthesized and used in the RT-LAMP. The optimization, sensitivity, and specificity of the RT-LAMP were evaluated. Our results showed that the RT-LAMP amplified the N gene with high specificity, efficiency, and rapidity at isothermal condition. The optimal reaction condition was achieved at 60°C for 30 min. The RT-LAMP assay was more sensitive than gel-based RT-PCR and PCR. It had a higher sensitivity than enzyme-linked immunosorbent assay (ELISA) using the equal virus templates. In addition, the established RT-LAMP differentiated TGEV from porcine epidemic diarrhea virus, porcine rotavirus, porcine pseudorabies virus, porcine reproductive and respiratory syndrome virus, and avian infectious bronchitis virus. The approach is suitable for detecting TGEV for field diagnostics or in less-equipped laboratories due to its convenience and simplicity. |
format | Online Article Text |
id | pubmed-7080135 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Springer-Verlag |
record_format | MEDLINE/PubMed |
spelling | pubmed-70801352020-03-23 Reverse Transcription Loop-Mediated Isothermal Amplification for Rapid Detection of Transmissible Gastroenteritis Virus Li, Pengchong Ren, Xiaofeng Curr Microbiol Article Transmissible gastroenteritis virus (TGEV) is the causative agent of porcine transmissible gastroenteritis, and sensitive detection methods are required for preventing the disease. In this article, reverse transcription-loop-mediated isothermal amplification (RT-LAMP) was developed to detect TGEV. Three pairs of primers targeting the nucleocapsid (N) gene of TGEV were synthesized and used in the RT-LAMP. The optimization, sensitivity, and specificity of the RT-LAMP were evaluated. Our results showed that the RT-LAMP amplified the N gene with high specificity, efficiency, and rapidity at isothermal condition. The optimal reaction condition was achieved at 60°C for 30 min. The RT-LAMP assay was more sensitive than gel-based RT-PCR and PCR. It had a higher sensitivity than enzyme-linked immunosorbent assay (ELISA) using the equal virus templates. In addition, the established RT-LAMP differentiated TGEV from porcine epidemic diarrhea virus, porcine rotavirus, porcine pseudorabies virus, porcine reproductive and respiratory syndrome virus, and avian infectious bronchitis virus. The approach is suitable for detecting TGEV for field diagnostics or in less-equipped laboratories due to its convenience and simplicity. Springer-Verlag 2010-12-02 2011 /pmc/articles/PMC7080135/ /pubmed/21127872 http://dx.doi.org/10.1007/s00284-010-9825-9 Text en © Springer Science+Business Media, LLC 2010 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Article Li, Pengchong Ren, Xiaofeng Reverse Transcription Loop-Mediated Isothermal Amplification for Rapid Detection of Transmissible Gastroenteritis Virus |
title | Reverse Transcription Loop-Mediated Isothermal Amplification for Rapid Detection of Transmissible Gastroenteritis Virus |
title_full | Reverse Transcription Loop-Mediated Isothermal Amplification for Rapid Detection of Transmissible Gastroenteritis Virus |
title_fullStr | Reverse Transcription Loop-Mediated Isothermal Amplification for Rapid Detection of Transmissible Gastroenteritis Virus |
title_full_unstemmed | Reverse Transcription Loop-Mediated Isothermal Amplification for Rapid Detection of Transmissible Gastroenteritis Virus |
title_short | Reverse Transcription Loop-Mediated Isothermal Amplification for Rapid Detection of Transmissible Gastroenteritis Virus |
title_sort | reverse transcription loop-mediated isothermal amplification for rapid detection of transmissible gastroenteritis virus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7080135/ https://www.ncbi.nlm.nih.gov/pubmed/21127872 http://dx.doi.org/10.1007/s00284-010-9825-9 |
work_keys_str_mv | AT lipengchong reversetranscriptionloopmediatedisothermalamplificationforrapiddetectionoftransmissiblegastroenteritisvirus AT renxiaofeng reversetranscriptionloopmediatedisothermalamplificationforrapiddetectionoftransmissiblegastroenteritisvirus |