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SIR dynamics in random networks with heterogeneous connectivity
Random networks with specified degree distributions have been proposed as realistic models of population structure, yet the problem of dynamically modeling SIR-type epidemics in random networks remains complex. I resolve this dilemma by showing how the SIR dynamics can be modeled with a system of th...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer-Verlag
2007
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7080148/ https://www.ncbi.nlm.nih.gov/pubmed/17668212 http://dx.doi.org/10.1007/s00285-007-0116-4 |
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author | Volz, Erik |
author_facet | Volz, Erik |
author_sort | Volz, Erik |
collection | PubMed |
description | Random networks with specified degree distributions have been proposed as realistic models of population structure, yet the problem of dynamically modeling SIR-type epidemics in random networks remains complex. I resolve this dilemma by showing how the SIR dynamics can be modeled with a system of three nonlinear ODE’s. The method makes use of the probability generating function (PGF) formalism for representing the degree distribution of a random network and makes use of network-centric quantities such as the number of edges in a well-defined category rather than node-centric quantities such as the number of infecteds or susceptibles. The PGF provides a simple means of translating between network and node-centric variables and determining the epidemic incidence at any time. The theory also provides a simple means of tracking the evolution of the degree distribution among susceptibles or infecteds. The equations are used to demonstrate the dramatic effects that the degree distribution plays on the final size of an epidemic as well as the speed with which it spreads through the population. Power law degree distributions are observed to generate an almost immediate expansion phase yet have a smaller final size compared to homogeneous degree distributions such as the Poisson. The equations are compared to stochastic simulations, which show good agreement with the theory. Finally, the dynamic equations provide an alternative way of determining the epidemic threshold where large-scale epidemics are expected to occur, and below which epidemic behavior is limited to finite-sized outbreaks. |
format | Online Article Text |
id | pubmed-7080148 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2007 |
publisher | Springer-Verlag |
record_format | MEDLINE/PubMed |
spelling | pubmed-70801482020-03-23 SIR dynamics in random networks with heterogeneous connectivity Volz, Erik J Math Biol Article Random networks with specified degree distributions have been proposed as realistic models of population structure, yet the problem of dynamically modeling SIR-type epidemics in random networks remains complex. I resolve this dilemma by showing how the SIR dynamics can be modeled with a system of three nonlinear ODE’s. The method makes use of the probability generating function (PGF) formalism for representing the degree distribution of a random network and makes use of network-centric quantities such as the number of edges in a well-defined category rather than node-centric quantities such as the number of infecteds or susceptibles. The PGF provides a simple means of translating between network and node-centric variables and determining the epidemic incidence at any time. The theory also provides a simple means of tracking the evolution of the degree distribution among susceptibles or infecteds. The equations are used to demonstrate the dramatic effects that the degree distribution plays on the final size of an epidemic as well as the speed with which it spreads through the population. Power law degree distributions are observed to generate an almost immediate expansion phase yet have a smaller final size compared to homogeneous degree distributions such as the Poisson. The equations are compared to stochastic simulations, which show good agreement with the theory. Finally, the dynamic equations provide an alternative way of determining the epidemic threshold where large-scale epidemics are expected to occur, and below which epidemic behavior is limited to finite-sized outbreaks. Springer-Verlag 2007-08-01 2008 /pmc/articles/PMC7080148/ /pubmed/17668212 http://dx.doi.org/10.1007/s00285-007-0116-4 Text en © Springer-Verlag 2007 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Article Volz, Erik SIR dynamics in random networks with heterogeneous connectivity |
title | SIR dynamics in random networks with heterogeneous connectivity |
title_full | SIR dynamics in random networks with heterogeneous connectivity |
title_fullStr | SIR dynamics in random networks with heterogeneous connectivity |
title_full_unstemmed | SIR dynamics in random networks with heterogeneous connectivity |
title_short | SIR dynamics in random networks with heterogeneous connectivity |
title_sort | sir dynamics in random networks with heterogeneous connectivity |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7080148/ https://www.ncbi.nlm.nih.gov/pubmed/17668212 http://dx.doi.org/10.1007/s00285-007-0116-4 |
work_keys_str_mv | AT volzerik sirdynamicsinrandomnetworkswithheterogeneousconnectivity |