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High expression of COPB2 predicts adverse outcomes: A potential therapeutic target for glioma

AIMS: To evaluate the clinical significance of coatomer protein complex subunit beta 2 (COPB2) in patients with glioma using a bioinformatics analysis. METHODS: Oncomine, GEO, and The Cancer Genome Atlas databases were used to examine the COPB2 transcript levels in glioma tissues. Gene expression pr...

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Autores principales: Zhou, Yan, Wang, Xuan, Huang, Xing, Li, Xu‐Dong, Cheng, Kai, Yu, Hao, Zhou, Yu‐Jie, Lv, Peng, Jiang, Xiao‐Bing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081167/
https://www.ncbi.nlm.nih.gov/pubmed/31710183
http://dx.doi.org/10.1111/cns.13254
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author Zhou, Yan
Wang, Xuan
Huang, Xing
Li, Xu‐Dong
Cheng, Kai
Yu, Hao
Zhou, Yu‐Jie
Lv, Peng
Jiang, Xiao‐Bing
author_facet Zhou, Yan
Wang, Xuan
Huang, Xing
Li, Xu‐Dong
Cheng, Kai
Yu, Hao
Zhou, Yu‐Jie
Lv, Peng
Jiang, Xiao‐Bing
author_sort Zhou, Yan
collection PubMed
description AIMS: To evaluate the clinical significance of coatomer protein complex subunit beta 2 (COPB2) in patients with glioma using a bioinformatics analysis. METHODS: Oncomine, GEO, and The Cancer Genome Atlas databases were used to examine the COPB2 transcript levels in glioma tissues. Gene expression profiles with clinical information from low‐grade glioma and glioblastoma (GBM) projects were analyzed for associations between COPB2 expression and clinicopathologic characteristics. Kaplan‐Meier survival and Cox regression analyses were used for survival analysis. Gene set enrichment analysis (GSEA) was conducted to screen the pathways involved in COPB2 expression. Gene set variation analysis (GSVA) and correlograms were performed to verify the correlations between COPB2 and inflammatory responses. Canonical correlation analyses examined whether COPB2‐high patients have more infiltrating inflammatory and immune cells. RESULTS: COPB2 was highly expressed in gliomas and high COPB2 expression correlated with shorter overall survival time and several poor clinical prognostic variables. GSEA indicated that some immune‐related pathways and other signaling pathways in cancer were associated with the COPB2‐high phenotype. The GSVA and canonical correlation analysis demonstrated that COPB2 expression was closely linked to inflammatory and immune responses, and higher immune cell infiltration. CONCLUSIONS: COPB2 may be a potential prognostic biomarker and an immunotherapeutic target for glioma.
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spelling pubmed-70811672020-03-23 High expression of COPB2 predicts adverse outcomes: A potential therapeutic target for glioma Zhou, Yan Wang, Xuan Huang, Xing Li, Xu‐Dong Cheng, Kai Yu, Hao Zhou, Yu‐Jie Lv, Peng Jiang, Xiao‐Bing CNS Neurosci Ther Original Articles AIMS: To evaluate the clinical significance of coatomer protein complex subunit beta 2 (COPB2) in patients with glioma using a bioinformatics analysis. METHODS: Oncomine, GEO, and The Cancer Genome Atlas databases were used to examine the COPB2 transcript levels in glioma tissues. Gene expression profiles with clinical information from low‐grade glioma and glioblastoma (GBM) projects were analyzed for associations between COPB2 expression and clinicopathologic characteristics. Kaplan‐Meier survival and Cox regression analyses were used for survival analysis. Gene set enrichment analysis (GSEA) was conducted to screen the pathways involved in COPB2 expression. Gene set variation analysis (GSVA) and correlograms were performed to verify the correlations between COPB2 and inflammatory responses. Canonical correlation analyses examined whether COPB2‐high patients have more infiltrating inflammatory and immune cells. RESULTS: COPB2 was highly expressed in gliomas and high COPB2 expression correlated with shorter overall survival time and several poor clinical prognostic variables. GSEA indicated that some immune‐related pathways and other signaling pathways in cancer were associated with the COPB2‐high phenotype. The GSVA and canonical correlation analysis demonstrated that COPB2 expression was closely linked to inflammatory and immune responses, and higher immune cell infiltration. CONCLUSIONS: COPB2 may be a potential prognostic biomarker and an immunotherapeutic target for glioma. John Wiley and Sons Inc. 2019-11-11 /pmc/articles/PMC7081167/ /pubmed/31710183 http://dx.doi.org/10.1111/cns.13254 Text en © 2019 The Authors. CNS Neuroscience & Therapeutics Published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Zhou, Yan
Wang, Xuan
Huang, Xing
Li, Xu‐Dong
Cheng, Kai
Yu, Hao
Zhou, Yu‐Jie
Lv, Peng
Jiang, Xiao‐Bing
High expression of COPB2 predicts adverse outcomes: A potential therapeutic target for glioma
title High expression of COPB2 predicts adverse outcomes: A potential therapeutic target for glioma
title_full High expression of COPB2 predicts adverse outcomes: A potential therapeutic target for glioma
title_fullStr High expression of COPB2 predicts adverse outcomes: A potential therapeutic target for glioma
title_full_unstemmed High expression of COPB2 predicts adverse outcomes: A potential therapeutic target for glioma
title_short High expression of COPB2 predicts adverse outcomes: A potential therapeutic target for glioma
title_sort high expression of copb2 predicts adverse outcomes: a potential therapeutic target for glioma
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081167/
https://www.ncbi.nlm.nih.gov/pubmed/31710183
http://dx.doi.org/10.1111/cns.13254
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