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Replication of FTO Gene associated with lean mass in a Meta-Analysis of Genome-Wide Association Studies
Sarcopenia is characterized by low skeletal muscle, a complex trait with high heritability. With the dramatically increasing prevalence of obesity, obesity and sarcopenia occur simultaneously, a condition known as sarcopenic obesity. Fat mass and obesity-associated (FTO) gene is a candidate gene of...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081265/ https://www.ncbi.nlm.nih.gov/pubmed/32193455 http://dx.doi.org/10.1038/s41598-020-61406-3 |
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author | Ran, Shu Jiang, Zi-Xuan He, Xiao Liu, Yu Zhang, Yu-Xue Zhang, Lei Pei, Yu-Fang Zhang, Meng Hai, Rong Gu, Gui-Shan Liu, Bao-Lin Tian, Qing Zhang, Yong-Hong Wang, Jing-Yu Deng, Hong-Wen |
author_facet | Ran, Shu Jiang, Zi-Xuan He, Xiao Liu, Yu Zhang, Yu-Xue Zhang, Lei Pei, Yu-Fang Zhang, Meng Hai, Rong Gu, Gui-Shan Liu, Bao-Lin Tian, Qing Zhang, Yong-Hong Wang, Jing-Yu Deng, Hong-Wen |
author_sort | Ran, Shu |
collection | PubMed |
description | Sarcopenia is characterized by low skeletal muscle, a complex trait with high heritability. With the dramatically increasing prevalence of obesity, obesity and sarcopenia occur simultaneously, a condition known as sarcopenic obesity. Fat mass and obesity-associated (FTO) gene is a candidate gene of obesity. To identify associations between lean mass and FTO gene, we performed a genome-wide association study (GWAS) of lean mass index (LMI) in 2207 unrelated Caucasian subjects and replicated major findings in two replication samples including 6,004 unrelated Caucasian and 38,292 unrelated Caucasian. We found 29 single nucleotide polymorphisms (SNPs) in FTO significantly associated with sarcopenia (combined p-values ranging from 5.92 × 10(−12) to 1.69 × 10(−9)). Potential biological functions of SNPs were analyzed by HaploReg v4.1, RegulomeDB, GTEx, IMPC and STRING. Our results provide suggestive evidence that FTO gene is associated with lean mass. |
format | Online Article Text |
id | pubmed-7081265 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70812652020-03-23 Replication of FTO Gene associated with lean mass in a Meta-Analysis of Genome-Wide Association Studies Ran, Shu Jiang, Zi-Xuan He, Xiao Liu, Yu Zhang, Yu-Xue Zhang, Lei Pei, Yu-Fang Zhang, Meng Hai, Rong Gu, Gui-Shan Liu, Bao-Lin Tian, Qing Zhang, Yong-Hong Wang, Jing-Yu Deng, Hong-Wen Sci Rep Article Sarcopenia is characterized by low skeletal muscle, a complex trait with high heritability. With the dramatically increasing prevalence of obesity, obesity and sarcopenia occur simultaneously, a condition known as sarcopenic obesity. Fat mass and obesity-associated (FTO) gene is a candidate gene of obesity. To identify associations between lean mass and FTO gene, we performed a genome-wide association study (GWAS) of lean mass index (LMI) in 2207 unrelated Caucasian subjects and replicated major findings in two replication samples including 6,004 unrelated Caucasian and 38,292 unrelated Caucasian. We found 29 single nucleotide polymorphisms (SNPs) in FTO significantly associated with sarcopenia (combined p-values ranging from 5.92 × 10(−12) to 1.69 × 10(−9)). Potential biological functions of SNPs were analyzed by HaploReg v4.1, RegulomeDB, GTEx, IMPC and STRING. Our results provide suggestive evidence that FTO gene is associated with lean mass. Nature Publishing Group UK 2020-03-19 /pmc/articles/PMC7081265/ /pubmed/32193455 http://dx.doi.org/10.1038/s41598-020-61406-3 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Ran, Shu Jiang, Zi-Xuan He, Xiao Liu, Yu Zhang, Yu-Xue Zhang, Lei Pei, Yu-Fang Zhang, Meng Hai, Rong Gu, Gui-Shan Liu, Bao-Lin Tian, Qing Zhang, Yong-Hong Wang, Jing-Yu Deng, Hong-Wen Replication of FTO Gene associated with lean mass in a Meta-Analysis of Genome-Wide Association Studies |
title | Replication of FTO Gene associated with lean mass in a Meta-Analysis of Genome-Wide Association Studies |
title_full | Replication of FTO Gene associated with lean mass in a Meta-Analysis of Genome-Wide Association Studies |
title_fullStr | Replication of FTO Gene associated with lean mass in a Meta-Analysis of Genome-Wide Association Studies |
title_full_unstemmed | Replication of FTO Gene associated with lean mass in a Meta-Analysis of Genome-Wide Association Studies |
title_short | Replication of FTO Gene associated with lean mass in a Meta-Analysis of Genome-Wide Association Studies |
title_sort | replication of fto gene associated with lean mass in a meta-analysis of genome-wide association studies |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081265/ https://www.ncbi.nlm.nih.gov/pubmed/32193455 http://dx.doi.org/10.1038/s41598-020-61406-3 |
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