Cargando…

Identification of Key Components in Colon Adenocarcinoma Using Transcriptome to Interactome Multilayer Framework

Complexity of cascading interrelations between molecular cell components at different levels from genome to metabolome ordains a massive difficulty in comprehending biological happenings. However, considering these complications in the systematic modelings will result in realistic and reliable outpu...

Descripción completa

Detalles Bibliográficos
Autores principales:	Pournoor, Ehsan, Mousavian, Zaynab, Dalini, Abbas Nowzari, Masoudi-Nejad, Ali
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2020
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081269/ https://www.ncbi.nlm.nih.gov/pubmed/32193399 http://dx.doi.org/10.1038/s41598-020-59605-z

Ejemplares similares

A propagation-based seed-centric local community detection for multilayer environment: The case study of colon adenocarcinoma
por: Pournoor, Ehsan, et al.
Publicado: (2021)

Differential network analysis and protein-protein interaction study reveals active protein modules in glucocorticoid resistance for infant acute lymphoblastic leukemia
por: Mousavian, Zaynab, et al.
Publicado: (2019)

Reconstruction of an Integrated Genome-Scale Co-Expression Network Reveals Key Modules Involved in Lung Adenocarcinoma
por: Bidkhori, Gholamreza, et al.
Publicado: (2013)

Appropriate time to apply control input to complex dynamical systems
por: Ebrahimi, Ali, et al.
Publicado: (2020)

CatbNet: A Multi Network Analyzer for Comparing and Analyzing the Topology of Biological Networks
por: Pournoor, Ehsan, et al.
Publicado: (2019)

Drug-target and disease networks: polypharmacology in the post-genomic era
por: Masoudi-Nejad, Ali, et al.
Publicado: (2013)

A computational model of stem cell molecular mechanism to maintain tissue homeostasis
por: Khorasani, Najme, et al.
Publicado: (2020)

Kavosh: a new algorithm for finding network motifs
por: Kashani, Zahra Razaghi Moghadam, et al.
Publicado: (2009)

Pin-Align: A New Dynamic Programming Approach to Align Protein-Protein Interaction Networks
por: Amir-Ghiasvand, Farid, et al.
Publicado: (2014)

Improving protein complex prediction by reconstructing a high-confidence protein-protein interaction network of Escherichia coli from different physical interaction data sources
por: Taghipour, Shirin, et al.
Publicado: (2017)

SpykeTorch: Efficient Simulation of Convolutional Spiking Neural Networks With at Most One Spike per Neuron
por: Mozafari, Milad, et al.
Publicado: (2019)

An Evidence-Based Combining Classifier for Brain Signal Analysis
por: Kheradpisheh, Saeed Reza, et al.
Publicado: (2014)

Evaluation of involved proteins in colon adenocarcinoma: an interactome analysis
por: Valizadeh, Reza, et al.
Publicado: (2017)

New scoring schema for finding motifs in DNA Sequences
por: Zare-Mirakabad, Fatemeh, et al.
Publicado: (2009)

Inverse RNA folding solution based on multi-objective genetic algorithm and Gibbs sampling method
por: Ganjtabesh, M, et al.
Publicado: (2013)

Cancerouspdomains: comprehensive analysis of cancer type-specific recurrent somatic mutations in proteins and domains
por: Hashemi, Seirana, et al.
Publicado: (2017)

Inferring multilayer interactome networks shaping phenotypic plasticity and evolution
por: Yang, Dengcheng, et al.
Publicado: (2021)

Genetic algorithm solution for double digest problem
por: Ganjtabesh, Mohammad, et al.
Publicado: (2012)

Integrating the interactome and the transcriptome of Drosophila
por: Murali, Thilakam, et al.
Publicado: (2014)

mully: An R Package to Create, Modify and Visualize Multilayered Graphs
por: Hammoud, Zaynab, et al.
Publicado: (2018)

Comparative Proteome Identifies Complement Component 3-Mediated Immune Response as Key Difference of Colon Adenocarcinoma and Rectal Adenocarcinoma
por: Liang, Jun-Ze, et al.
Publicado: (2021)

An empirical framework for binary interactome mapping
por: Venkatesan, Kavitha, et al.
Publicado: (2008)

FunGraph: A statistical protocol to reconstruct omnigenic multilayer interactome networks for complex traits
por: Dong, Ang, et al.
Publicado: (2021)

A deep learning-based framework for predicting survival-associated groups in colon cancer by integrating multi-omics and clinical data
por: Salimy, Siamak, et al.
Publicado: (2023)

Identification of Key Carcinogenic Genes in Colon Adenocarcinoma
por: Dai, Yangbin, et al.
Publicado: (2022)

Integrated interactome and transcriptome analysis reveals key host factors critical for SARS-CoV-2 infection
por: Sheng, Jie, et al.
Publicado: (2023)

A Multilayer Interactome Network Constructed in a Forest Poplar Population Mediates the Pleiotropic Control of Complex Traits
por: Gong, Huiying, et al.
Publicado: (2021)

Interactome Analysis of the ER Stress Sensor Perk Uncovers Key Components of ER-Mitochondria Contact Sites and Ca(2+) Signalling
por: Sassano, Maria Livia, et al.
Publicado: (2021)

Identifying components of the hair-cell interactome involved in cochlear amplification
por: Zheng, Jing, et al.
Publicado: (2009)

Identifying candidate agents for lung adenocarcinoma by walking the human interactome
por: Sun, Yajiao, et al.
Publicado: (2016)

Yeast Protein Interactome topology provides framework for coordinated-functionality
por: Valente, André X. C. N., et al.
Publicado: (2006)

Patterns Prediction of Chemotherapy Sensitivity in Cancer Cell lines Using FTIR Spectrum, Neural Network and Principal Components Analysis
por: Zendehdel, Rezvan, et al.
Publicado: (2012)

Cisplatin Resistant Patterns in Ovarian Cell Line Using FTIR and Principle Component Analysis
por: Zendehdel, Rezvan, et al.
Publicado: (2012)

FRnet-DTI: Deep convolutional neural network for drug-target interaction prediction
por: Rayhan, Farshid, et al.
Publicado: (2020)

StrongestPath: a Cytoscape application for protein–protein interaction analysis
por: Mousavian, Zaynab, et al.
Publicado: (2021)

Immunological hyporesponsiveness in tuberculosis: The role of mycobacterial glycolipids
por: Correia-Neves, Margarida, et al.
Publicado: (2022)

Multilayer radiation shield for satellite electronic components protection
por: Daneshvar, Hamideh, et al.
Publicado: (2021)

Transcriptomic basis and evolution of the ant nurse-larval social interactome
por: Warner, Michael R., et al.
Publicado: (2019)

Exploring ceRNA networks for key biomarkers in breast cancer subtypes and immune regulation
por: Shariatmadar Taleghani, Alireza, et al.
Publicado: (2023)

Colon adenoma and adenocarcinoma with clear cell components - two case reports
por: Oyama, Yuzo, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_vd61bragajbeqatlmcefpalgej