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Assessment of the ptxD gene as a growth and selective marker in Trichoderma atroviride using Pccg6, a novel constitutive promoter

BACKGROUND: Trichoderma species are among the most effective cell factories to produce recombinant proteins, whose productivity relies on the molecular toolkit and promoters available for the expression of the target protein. Although inducible promoter systems have been developed for producing reco...

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Autores principales: Carreras-Villaseñor, Nohemí, Rico-Ruiz, José Guillermo, Chávez Montes, Ricardo A., Yong-Villalobos, Lenin, López-Hernández, José Fabricio, Martínez-Hernández, Pedro, Herrera-Estrella, Luis, Herrera-Estrella, Alfredo, López-Arredondo, Damar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081547/
https://www.ncbi.nlm.nih.gov/pubmed/32188455
http://dx.doi.org/10.1186/s12934-020-01326-z
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author Carreras-Villaseñor, Nohemí
Rico-Ruiz, José Guillermo
Chávez Montes, Ricardo A.
Yong-Villalobos, Lenin
López-Hernández, José Fabricio
Martínez-Hernández, Pedro
Herrera-Estrella, Luis
Herrera-Estrella, Alfredo
López-Arredondo, Damar
author_facet Carreras-Villaseñor, Nohemí
Rico-Ruiz, José Guillermo
Chávez Montes, Ricardo A.
Yong-Villalobos, Lenin
López-Hernández, José Fabricio
Martínez-Hernández, Pedro
Herrera-Estrella, Luis
Herrera-Estrella, Alfredo
López-Arredondo, Damar
author_sort Carreras-Villaseñor, Nohemí
collection PubMed
description BACKGROUND: Trichoderma species are among the most effective cell factories to produce recombinant proteins, whose productivity relies on the molecular toolkit and promoters available for the expression of the target protein. Although inducible promoter systems have been developed for producing recombinant proteins in Trichoderma, constitutive promoters are often a desirable alternative. Constitutive promoters are simple to use, do not require external stimuli or chemical inducers to be activated, and lead to purer enzyme preparations. Moreover, most of the promoters for homologous and heterologous expression reported in Trichoderma have been commonly evaluated by directly assessing production of industrial enzymes, requiring optimization of laborious protocols. RESULTS: Here we report the identification of Pccg6, a novel Trichoderma atroviride constitutive promoter, that has similar transcriptional strength as that of the commonly used pki1 promoter. Pccg6 displayed conserved arrangements of transcription factor binding sites between promoter sequences of Trichoderma ccg6 orthologues genes, potentially involved in their regulatory properties. The predicted ccg6-encoded protein potentially belongs to the SPE1/SPI1 protein family and shares high identity with CCG6 orthologue sequences from other fungal species including Trichoderma reesei, Trichoderma virens, Trichoderma asperellum, and to a lesser extent to that of Neurospora crassa. We also report the use of the Pccg6 promoter to drive the expression of PTXD, a phosphite oxidoreductase of bacterial origin, which allowed T. atroviride to utilize phosphite as a sole source of phosphorus. We propose ptxD as a growth reporter gene that allows real-time comparison of the functionality of different promoters by monitoring growth of Trichoderma transgenic lines and enzymatic activity of PTXD. Finally, we show that constitutive expression of ptxD provided T. atroviride a competitive advantage to outgrow bacterial contaminants when supplied with phosphite as a sole source of phosphorus. CONCLUSIONS: A new constitutive promoter, ccg6, for expression of homologous and heterologous proteins has been identified and tested in T. atroviride to express PTXD, which resulted in an effective and visible phenotype to evaluate transcriptional activity of sequence promoters. Use of PTXD as a growth marker holds great potential for assessing activity of other promoters and for biotechnological applications as a contamination control system.
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spelling pubmed-70815472020-03-23 Assessment of the ptxD gene as a growth and selective marker in Trichoderma atroviride using Pccg6, a novel constitutive promoter Carreras-Villaseñor, Nohemí Rico-Ruiz, José Guillermo Chávez Montes, Ricardo A. Yong-Villalobos, Lenin López-Hernández, José Fabricio Martínez-Hernández, Pedro Herrera-Estrella, Luis Herrera-Estrella, Alfredo López-Arredondo, Damar Microb Cell Fact Research BACKGROUND: Trichoderma species are among the most effective cell factories to produce recombinant proteins, whose productivity relies on the molecular toolkit and promoters available for the expression of the target protein. Although inducible promoter systems have been developed for producing recombinant proteins in Trichoderma, constitutive promoters are often a desirable alternative. Constitutive promoters are simple to use, do not require external stimuli or chemical inducers to be activated, and lead to purer enzyme preparations. Moreover, most of the promoters for homologous and heterologous expression reported in Trichoderma have been commonly evaluated by directly assessing production of industrial enzymes, requiring optimization of laborious protocols. RESULTS: Here we report the identification of Pccg6, a novel Trichoderma atroviride constitutive promoter, that has similar transcriptional strength as that of the commonly used pki1 promoter. Pccg6 displayed conserved arrangements of transcription factor binding sites between promoter sequences of Trichoderma ccg6 orthologues genes, potentially involved in their regulatory properties. The predicted ccg6-encoded protein potentially belongs to the SPE1/SPI1 protein family and shares high identity with CCG6 orthologue sequences from other fungal species including Trichoderma reesei, Trichoderma virens, Trichoderma asperellum, and to a lesser extent to that of Neurospora crassa. We also report the use of the Pccg6 promoter to drive the expression of PTXD, a phosphite oxidoreductase of bacterial origin, which allowed T. atroviride to utilize phosphite as a sole source of phosphorus. We propose ptxD as a growth reporter gene that allows real-time comparison of the functionality of different promoters by monitoring growth of Trichoderma transgenic lines and enzymatic activity of PTXD. Finally, we show that constitutive expression of ptxD provided T. atroviride a competitive advantage to outgrow bacterial contaminants when supplied with phosphite as a sole source of phosphorus. CONCLUSIONS: A new constitutive promoter, ccg6, for expression of homologous and heterologous proteins has been identified and tested in T. atroviride to express PTXD, which resulted in an effective and visible phenotype to evaluate transcriptional activity of sequence promoters. Use of PTXD as a growth marker holds great potential for assessing activity of other promoters and for biotechnological applications as a contamination control system. BioMed Central 2020-03-18 /pmc/articles/PMC7081547/ /pubmed/32188455 http://dx.doi.org/10.1186/s12934-020-01326-z Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Carreras-Villaseñor, Nohemí
Rico-Ruiz, José Guillermo
Chávez Montes, Ricardo A.
Yong-Villalobos, Lenin
López-Hernández, José Fabricio
Martínez-Hernández, Pedro
Herrera-Estrella, Luis
Herrera-Estrella, Alfredo
López-Arredondo, Damar
Assessment of the ptxD gene as a growth and selective marker in Trichoderma atroviride using Pccg6, a novel constitutive promoter
title Assessment of the ptxD gene as a growth and selective marker in Trichoderma atroviride using Pccg6, a novel constitutive promoter
title_full Assessment of the ptxD gene as a growth and selective marker in Trichoderma atroviride using Pccg6, a novel constitutive promoter
title_fullStr Assessment of the ptxD gene as a growth and selective marker in Trichoderma atroviride using Pccg6, a novel constitutive promoter
title_full_unstemmed Assessment of the ptxD gene as a growth and selective marker in Trichoderma atroviride using Pccg6, a novel constitutive promoter
title_short Assessment of the ptxD gene as a growth and selective marker in Trichoderma atroviride using Pccg6, a novel constitutive promoter
title_sort assessment of the ptxd gene as a growth and selective marker in trichoderma atroviride using pccg6, a novel constitutive promoter
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081547/
https://www.ncbi.nlm.nih.gov/pubmed/32188455
http://dx.doi.org/10.1186/s12934-020-01326-z
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