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The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea

To determine the Dysgonia stuposa mitochondrial genome (mitogenome) structure and to clarify its phylogenetic position, the entire mitogenome of D. stuposa was sequenced and annotated. The D. stuposa mitogenome is 15,721 bp in size and contains 37 genes (protein-coding genes, transfer RNA genes, rib...

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Autores principales: Sun, Yuxuan, Zhu, Yeshu, Chen, Chen, Zhu, Qunshan, Zhu, Qianqian, Zhou, Yanyue, Zhou, Xiaojun, Zhu, Peijun, Li, Jun, Zhang, Haijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081777/
https://www.ncbi.nlm.nih.gov/pubmed/32211241
http://dx.doi.org/10.7717/peerj.8780
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author Sun, Yuxuan
Zhu, Yeshu
Chen, Chen
Zhu, Qunshan
Zhu, Qianqian
Zhou, Yanyue
Zhou, Xiaojun
Zhu, Peijun
Li, Jun
Zhang, Haijun
author_facet Sun, Yuxuan
Zhu, Yeshu
Chen, Chen
Zhu, Qunshan
Zhu, Qianqian
Zhou, Yanyue
Zhou, Xiaojun
Zhu, Peijun
Li, Jun
Zhang, Haijun
author_sort Sun, Yuxuan
collection PubMed
description To determine the Dysgonia stuposa mitochondrial genome (mitogenome) structure and to clarify its phylogenetic position, the entire mitogenome of D. stuposa was sequenced and annotated. The D. stuposa mitogenome is 15,721 bp in size and contains 37 genes (protein-coding genes, transfer RNA genes, ribosomal RNA genes) usually found in lepidopteran mitogenomes. The newly sequenced mitogenome contained some common features reported in other Erebidae species, e.g., an A+T biased nucleotide composition and a non-canonical start codon for cox1 (CGA). Like other insect mitogenomes, the D. stuposa mitogenome had a conserved sequence ‘ATACTAA’ in an intergenic spacer between trnS2 and nad1, and a motif ‘ATAGA’ followed by a 20 bp poly-T stretch in the A+T rich region. Phylogenetic analyses supported D. stuposa as part of the Erebidae family and reconfirmed the monophyly of the subfamilies Arctiinae, Catocalinae and Lymantriinae within Erebidae.
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spelling pubmed-70817772020-03-24 The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea Sun, Yuxuan Zhu, Yeshu Chen, Chen Zhu, Qunshan Zhu, Qianqian Zhou, Yanyue Zhou, Xiaojun Zhu, Peijun Li, Jun Zhang, Haijun PeerJ Entomology To determine the Dysgonia stuposa mitochondrial genome (mitogenome) structure and to clarify its phylogenetic position, the entire mitogenome of D. stuposa was sequenced and annotated. The D. stuposa mitogenome is 15,721 bp in size and contains 37 genes (protein-coding genes, transfer RNA genes, ribosomal RNA genes) usually found in lepidopteran mitogenomes. The newly sequenced mitogenome contained some common features reported in other Erebidae species, e.g., an A+T biased nucleotide composition and a non-canonical start codon for cox1 (CGA). Like other insect mitogenomes, the D. stuposa mitogenome had a conserved sequence ‘ATACTAA’ in an intergenic spacer between trnS2 and nad1, and a motif ‘ATAGA’ followed by a 20 bp poly-T stretch in the A+T rich region. Phylogenetic analyses supported D. stuposa as part of the Erebidae family and reconfirmed the monophyly of the subfamilies Arctiinae, Catocalinae and Lymantriinae within Erebidae. PeerJ Inc. 2020-03-16 /pmc/articles/PMC7081777/ /pubmed/32211241 http://dx.doi.org/10.7717/peerj.8780 Text en ©2020 Sun et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Entomology
Sun, Yuxuan
Zhu, Yeshu
Chen, Chen
Zhu, Qunshan
Zhu, Qianqian
Zhou, Yanyue
Zhou, Xiaojun
Zhu, Peijun
Li, Jun
Zhang, Haijun
The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea
title The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea
title_full The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea
title_fullStr The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea
title_full_unstemmed The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea
title_short The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea
title_sort complete mitochondrial genome of dysgonia stuposa (lepidoptera: erebidae) and phylogenetic relationships within noctuoidea
topic Entomology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081777/
https://www.ncbi.nlm.nih.gov/pubmed/32211241
http://dx.doi.org/10.7717/peerj.8780
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