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The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea
To determine the Dysgonia stuposa mitochondrial genome (mitogenome) structure and to clarify its phylogenetic position, the entire mitogenome of D. stuposa was sequenced and annotated. The D. stuposa mitogenome is 15,721 bp in size and contains 37 genes (protein-coding genes, transfer RNA genes, rib...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081777/ https://www.ncbi.nlm.nih.gov/pubmed/32211241 http://dx.doi.org/10.7717/peerj.8780 |
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author | Sun, Yuxuan Zhu, Yeshu Chen, Chen Zhu, Qunshan Zhu, Qianqian Zhou, Yanyue Zhou, Xiaojun Zhu, Peijun Li, Jun Zhang, Haijun |
author_facet | Sun, Yuxuan Zhu, Yeshu Chen, Chen Zhu, Qunshan Zhu, Qianqian Zhou, Yanyue Zhou, Xiaojun Zhu, Peijun Li, Jun Zhang, Haijun |
author_sort | Sun, Yuxuan |
collection | PubMed |
description | To determine the Dysgonia stuposa mitochondrial genome (mitogenome) structure and to clarify its phylogenetic position, the entire mitogenome of D. stuposa was sequenced and annotated. The D. stuposa mitogenome is 15,721 bp in size and contains 37 genes (protein-coding genes, transfer RNA genes, ribosomal RNA genes) usually found in lepidopteran mitogenomes. The newly sequenced mitogenome contained some common features reported in other Erebidae species, e.g., an A+T biased nucleotide composition and a non-canonical start codon for cox1 (CGA). Like other insect mitogenomes, the D. stuposa mitogenome had a conserved sequence ‘ATACTAA’ in an intergenic spacer between trnS2 and nad1, and a motif ‘ATAGA’ followed by a 20 bp poly-T stretch in the A+T rich region. Phylogenetic analyses supported D. stuposa as part of the Erebidae family and reconfirmed the monophyly of the subfamilies Arctiinae, Catocalinae and Lymantriinae within Erebidae. |
format | Online Article Text |
id | pubmed-7081777 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-70817772020-03-24 The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea Sun, Yuxuan Zhu, Yeshu Chen, Chen Zhu, Qunshan Zhu, Qianqian Zhou, Yanyue Zhou, Xiaojun Zhu, Peijun Li, Jun Zhang, Haijun PeerJ Entomology To determine the Dysgonia stuposa mitochondrial genome (mitogenome) structure and to clarify its phylogenetic position, the entire mitogenome of D. stuposa was sequenced and annotated. The D. stuposa mitogenome is 15,721 bp in size and contains 37 genes (protein-coding genes, transfer RNA genes, ribosomal RNA genes) usually found in lepidopteran mitogenomes. The newly sequenced mitogenome contained some common features reported in other Erebidae species, e.g., an A+T biased nucleotide composition and a non-canonical start codon for cox1 (CGA). Like other insect mitogenomes, the D. stuposa mitogenome had a conserved sequence ‘ATACTAA’ in an intergenic spacer between trnS2 and nad1, and a motif ‘ATAGA’ followed by a 20 bp poly-T stretch in the A+T rich region. Phylogenetic analyses supported D. stuposa as part of the Erebidae family and reconfirmed the monophyly of the subfamilies Arctiinae, Catocalinae and Lymantriinae within Erebidae. PeerJ Inc. 2020-03-16 /pmc/articles/PMC7081777/ /pubmed/32211241 http://dx.doi.org/10.7717/peerj.8780 Text en ©2020 Sun et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Entomology Sun, Yuxuan Zhu, Yeshu Chen, Chen Zhu, Qunshan Zhu, Qianqian Zhou, Yanyue Zhou, Xiaojun Zhu, Peijun Li, Jun Zhang, Haijun The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea |
title | The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea |
title_full | The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea |
title_fullStr | The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea |
title_full_unstemmed | The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea |
title_short | The complete mitochondrial genome of Dysgonia stuposa (Lepidoptera: Erebidae) and phylogenetic relationships within Noctuoidea |
title_sort | complete mitochondrial genome of dysgonia stuposa (lepidoptera: erebidae) and phylogenetic relationships within noctuoidea |
topic | Entomology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081777/ https://www.ncbi.nlm.nih.gov/pubmed/32211241 http://dx.doi.org/10.7717/peerj.8780 |
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