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Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks
We analyzed protein expression data for Lupus patients, which have been obtained from publicly available databases. A combination of systems biology and statistical thermodynamics approaches was used to extract topological properties of the associated protein-protein interaction networks for each of...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081981/ https://www.ncbi.nlm.nih.gov/pubmed/32191711 http://dx.doi.org/10.1371/journal.pone.0226883 |
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author | Brant, Elizabeth J. Rietman, Edward A. Klement, Giannoula Lakka Cavaglia, Marco Tuszynski, Jack A. |
author_facet | Brant, Elizabeth J. Rietman, Edward A. Klement, Giannoula Lakka Cavaglia, Marco Tuszynski, Jack A. |
author_sort | Brant, Elizabeth J. |
collection | PubMed |
description | We analyzed protein expression data for Lupus patients, which have been obtained from publicly available databases. A combination of systems biology and statistical thermodynamics approaches was used to extract topological properties of the associated protein-protein interaction networks for each of the 291 patients whose samples were used to provide the molecular data. We have concluded that among the many proteins that appear to play critical roles in this pathology, most of them are either ribosomal proteins, ubiquitination pathway proteins or heat shock proteins. We propose some of the proteins identified in this study to be considered for drug targeting. |
format | Online Article Text |
id | pubmed-7081981 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-70819812020-03-24 Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks Brant, Elizabeth J. Rietman, Edward A. Klement, Giannoula Lakka Cavaglia, Marco Tuszynski, Jack A. PLoS One Research Article We analyzed protein expression data for Lupus patients, which have been obtained from publicly available databases. A combination of systems biology and statistical thermodynamics approaches was used to extract topological properties of the associated protein-protein interaction networks for each of the 291 patients whose samples were used to provide the molecular data. We have concluded that among the many proteins that appear to play critical roles in this pathology, most of them are either ribosomal proteins, ubiquitination pathway proteins or heat shock proteins. We propose some of the proteins identified in this study to be considered for drug targeting. Public Library of Science 2020-03-19 /pmc/articles/PMC7081981/ /pubmed/32191711 http://dx.doi.org/10.1371/journal.pone.0226883 Text en © 2020 Brant et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Brant, Elizabeth J. Rietman, Edward A. Klement, Giannoula Lakka Cavaglia, Marco Tuszynski, Jack A. Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks |
title | Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks |
title_full | Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks |
title_fullStr | Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks |
title_full_unstemmed | Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks |
title_short | Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks |
title_sort | personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081981/ https://www.ncbi.nlm.nih.gov/pubmed/32191711 http://dx.doi.org/10.1371/journal.pone.0226883 |
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