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ProteoClade: A taxonomic toolkit for multi-species and metaproteomic analysis

We present ProteoClade, a Python toolkit that performs taxa-specific peptide assignment, protein inference, and quantitation for multi-species proteomics experiments. ProteoClade scales to hundreds of millions of protein sequences, requires minimal computational resources, and is open source, multi-...

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Detalles Bibliográficos
Autores principales: Mooradian, Arshag D., van der Post, Sjoerd, Naegle, Kristen M., Held, Jason M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7082058/
https://www.ncbi.nlm.nih.gov/pubmed/32150535
http://dx.doi.org/10.1371/journal.pcbi.1007741