Coding-Complete RNA Virus Genomes Assembled from Murine Cecal Metatranscriptomes

Efforts to catalog viral diversity in the gut microbiome have largely focused on DNA viruses, while RNA viruses remain understudied. To address this, we screened assemblies of previously published mouse gut metatranscriptomes for the presence of RNA viruses. We identified the coding-complete genomes...

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Detalles Bibliográficos
Autores principales: Stough, Joshua M. A., Beaudoin, Andrew J., Schloss, Patrick D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7082449/
https://www.ncbi.nlm.nih.gov/pubmed/32193230
http://dx.doi.org/10.1128/MRA.00018-20
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author Stough, Joshua M. A.
Beaudoin, Andrew J.
Schloss, Patrick D.
author_facet Stough, Joshua M. A.
Beaudoin, Andrew J.
Schloss, Patrick D.
author_sort Stough, Joshua M. A.
collection PubMed
description Efforts to catalog viral diversity in the gut microbiome have largely focused on DNA viruses, while RNA viruses remain understudied. To address this, we screened assemblies of previously published mouse gut metatranscriptomes for the presence of RNA viruses. We identified the coding-complete genomes of an astrovirus and five mitovirus-like viruses.
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spelling pubmed-70824492020-04-02 Coding-Complete RNA Virus Genomes Assembled from Murine Cecal Metatranscriptomes Stough, Joshua M. A. Beaudoin, Andrew J. Schloss, Patrick D. Microbiol Resour Announc Genome Sequences Efforts to catalog viral diversity in the gut microbiome have largely focused on DNA viruses, while RNA viruses remain understudied. To address this, we screened assemblies of previously published mouse gut metatranscriptomes for the presence of RNA viruses. We identified the coding-complete genomes of an astrovirus and five mitovirus-like viruses. American Society for Microbiology 2020-03-19 /pmc/articles/PMC7082449/ /pubmed/32193230 http://dx.doi.org/10.1128/MRA.00018-20 Text en Copyright © 2020 Stough et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Stough, Joshua M. A.
Beaudoin, Andrew J.
Schloss, Patrick D.
Coding-Complete RNA Virus Genomes Assembled from Murine Cecal Metatranscriptomes
title Coding-Complete RNA Virus Genomes Assembled from Murine Cecal Metatranscriptomes
title_full Coding-Complete RNA Virus Genomes Assembled from Murine Cecal Metatranscriptomes
title_fullStr Coding-Complete RNA Virus Genomes Assembled from Murine Cecal Metatranscriptomes
title_full_unstemmed Coding-Complete RNA Virus Genomes Assembled from Murine Cecal Metatranscriptomes
title_short Coding-Complete RNA Virus Genomes Assembled from Murine Cecal Metatranscriptomes
title_sort coding-complete rna virus genomes assembled from murine cecal metatranscriptomes
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7082449/
https://www.ncbi.nlm.nih.gov/pubmed/32193230
http://dx.doi.org/10.1128/MRA.00018-20
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