Analysis of the Microbiome of Rainbow Trout (Oncorhynchus mykiss) Exposed to the Pathogen Flavobacterium psychrophilum 10094

Rainbow trout that were resistant or susceptible to Flavobacterium psychrophilum infection were compared with respect to their microbial composition by using 16S rRNA V3-V4 sequencing. The differences occurred in gills, where resistant fish displayed a greater abundance of the phylum Proteobacteria...

Descripción completa

Detalles Bibliográficos
Autores principales: Valdés, Natalia, Gonzalez, Alex, Garcia, Veronica, Tello, Mario
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Omics Data Sets
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7082464/
https://www.ncbi.nlm.nih.gov/pubmed/32193245
http://dx.doi.org/10.1128/MRA.01562-19
_version_ 1783508353649999872
author Valdés, Natalia
Gonzalez, Alex
Garcia, Veronica
Tello, Mario
author_facet Valdés, Natalia
Gonzalez, Alex
Garcia, Veronica
Tello, Mario
author_sort Valdés, Natalia
collection PubMed
description Rainbow trout that were resistant or susceptible to Flavobacterium psychrophilum infection were compared with respect to their microbial composition by using 16S rRNA V3-V4 sequencing. The differences occurred in gills, where resistant fish displayed a greater abundance of the phylum Proteobacteria and a smaller proportion of Firmicutes relative to those of susceptible fish.
format Online
Article
Text
id pubmed-7082464
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-70824642020-04-02 Analysis of the Microbiome of Rainbow Trout (Oncorhynchus mykiss) Exposed to the Pathogen Flavobacterium psychrophilum 10094 Valdés, Natalia Gonzalez, Alex Garcia, Veronica Tello, Mario Microbiol Resour Announc Omics Data Sets Rainbow trout that were resistant or susceptible to Flavobacterium psychrophilum infection were compared with respect to their microbial composition by using 16S rRNA V3-V4 sequencing. The differences occurred in gills, where resistant fish displayed a greater abundance of the phylum Proteobacteria and a smaller proportion of Firmicutes relative to those of susceptible fish. American Society for Microbiology 2020-03-19 /pmc/articles/PMC7082464/ /pubmed/32193245 http://dx.doi.org/10.1128/MRA.01562-19 Text en Copyright © 2020 Valdés et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Omics Data Sets
Valdés, Natalia
Gonzalez, Alex
Garcia, Veronica
Tello, Mario
Analysis of the Microbiome of Rainbow Trout (Oncorhynchus mykiss) Exposed to the Pathogen Flavobacterium psychrophilum 10094
title Analysis of the Microbiome of Rainbow Trout (Oncorhynchus mykiss) Exposed to the Pathogen Flavobacterium psychrophilum 10094
title_full Analysis of the Microbiome of Rainbow Trout (Oncorhynchus mykiss) Exposed to the Pathogen Flavobacterium psychrophilum 10094
title_fullStr Analysis of the Microbiome of Rainbow Trout (Oncorhynchus mykiss) Exposed to the Pathogen Flavobacterium psychrophilum 10094
title_full_unstemmed Analysis of the Microbiome of Rainbow Trout (Oncorhynchus mykiss) Exposed to the Pathogen Flavobacterium psychrophilum 10094
title_short Analysis of the Microbiome of Rainbow Trout (Oncorhynchus mykiss) Exposed to the Pathogen Flavobacterium psychrophilum 10094
title_sort analysis of the microbiome of rainbow trout (oncorhynchus mykiss) exposed to the pathogen flavobacterium psychrophilum 10094
topic Omics Data Sets
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7082464/
https://www.ncbi.nlm.nih.gov/pubmed/32193245
http://dx.doi.org/10.1128/MRA.01562-19
work_keys_str_mv AT valdesnatalia analysisofthemicrobiomeofrainbowtroutoncorhynchusmykissexposedtothepathogenflavobacteriumpsychrophilum10094
AT gonzalezalex analysisofthemicrobiomeofrainbowtroutoncorhynchusmykissexposedtothepathogenflavobacteriumpsychrophilum10094
AT garciaveronica analysisofthemicrobiomeofrainbowtroutoncorhynchusmykissexposedtothepathogenflavobacteriumpsychrophilum10094
AT tellomario analysisofthemicrobiomeofrainbowtroutoncorhynchusmykissexposedtothepathogenflavobacteriumpsychrophilum10094

Ejemplares similares