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Two New Unspecific Peroxygenases from Heterologous Expression of Fungal Genes in Escherichia coli

Unspecific peroxygenases (UPOs) constitute a new family of fungal heme-thiolate enzymes in which there is high biotechnological interest. Although several thousand genes encoding hypothetical UPO-type proteins have been identified in sequenced fungal genomes and other databases, only a few UPO enzym...

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Autores principales: Linde, Dolores, Olmedo, Andrés, González-Benjumea, Alejandro, Estévez, María, Renau-Mínguez, Chantal, Carro, Juan, Fernández-Fueyo, Elena, Gutiérrez, Ana, Martínez, Angel T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7082571/
https://www.ncbi.nlm.nih.gov/pubmed/31980430
http://dx.doi.org/10.1128/AEM.02899-19
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author Linde, Dolores
Olmedo, Andrés
González-Benjumea, Alejandro
Estévez, María
Renau-Mínguez, Chantal
Carro, Juan
Fernández-Fueyo, Elena
Gutiérrez, Ana
Martínez, Angel T.
author_facet Linde, Dolores
Olmedo, Andrés
González-Benjumea, Alejandro
Estévez, María
Renau-Mínguez, Chantal
Carro, Juan
Fernández-Fueyo, Elena
Gutiérrez, Ana
Martínez, Angel T.
author_sort Linde, Dolores
collection PubMed
description Unspecific peroxygenases (UPOs) constitute a new family of fungal heme-thiolate enzymes in which there is high biotechnological interest. Although several thousand genes encoding hypothetical UPO-type proteins have been identified in sequenced fungal genomes and other databases, only a few UPO enzymes have been experimentally characterized to date. Therefore, gene screening and heterologous expression from genetic databases are a priority in the search for ad hoc UPOs for oxyfunctionalization reactions of interest. Very recently, Escherichia coli production of a previously described basidiomycete UPO (as a soluble and active enzyme) has been reported. Here, we explored this convenient heterologous expression system to obtain the protein products from available putative UPO genes. In this way, two UPOs from the ascomycetes Collariella virescens (syn., Chaetomium virescens) and Daldinia caldariorum were successfully obtained, purified, and characterized. Comparison of their kinetic constants for oxidation of model substrates revealed 10- to 20-fold-higher catalytic efficiency of the latter enzyme in oxidizing simple aromatic compounds (such as veratryl alcohol, naphthalene, and benzyl alcohol). Homology molecular models of these enzymes showed three conserved and two differing residues in the distal side of the heme (the latter representing two different positions of a phenylalanine residue). Interestingly, replacement of the C. virescens UPO Phe88 by the homologous residue in the D. caldariorum UPO resulted in an F88L variant with 5- to 21-fold-higher efficiency in oxidizing these aromatic compounds. IMPORTANCE UPOs catalyze regio- and stereoselective oxygenations of both aromatic and aliphatic compounds. Similar reactions were previously described for cytochrome P450 monooxygenases, but UPOs have the noteworthy biotechnological advantage of being stable enzymes requiring only H(2)O(2) to be activated. Both characteristics are related to the extracellular nature of UPOs as secreted proteins. In the present study, the limited repertoire of UPO enzymes available for organic synthesis and other applications is expanded with the description of two new ascomycete UPOs obtained by Escherichia coli expression of the corresponding genes as soluble and active enzymes. Moreover, directed mutagenesis in E. coli, together with enzyme molecular modeling, provided relevant structure-function information on aromatic substrate oxidation by these two new biocatalysts.
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spelling pubmed-70825712020-04-02 Two New Unspecific Peroxygenases from Heterologous Expression of Fungal Genes in Escherichia coli Linde, Dolores Olmedo, Andrés González-Benjumea, Alejandro Estévez, María Renau-Mínguez, Chantal Carro, Juan Fernández-Fueyo, Elena Gutiérrez, Ana Martínez, Angel T. Appl Environ Microbiol Enzymology and Protein Engineering Unspecific peroxygenases (UPOs) constitute a new family of fungal heme-thiolate enzymes in which there is high biotechnological interest. Although several thousand genes encoding hypothetical UPO-type proteins have been identified in sequenced fungal genomes and other databases, only a few UPO enzymes have been experimentally characterized to date. Therefore, gene screening and heterologous expression from genetic databases are a priority in the search for ad hoc UPOs for oxyfunctionalization reactions of interest. Very recently, Escherichia coli production of a previously described basidiomycete UPO (as a soluble and active enzyme) has been reported. Here, we explored this convenient heterologous expression system to obtain the protein products from available putative UPO genes. In this way, two UPOs from the ascomycetes Collariella virescens (syn., Chaetomium virescens) and Daldinia caldariorum were successfully obtained, purified, and characterized. Comparison of their kinetic constants for oxidation of model substrates revealed 10- to 20-fold-higher catalytic efficiency of the latter enzyme in oxidizing simple aromatic compounds (such as veratryl alcohol, naphthalene, and benzyl alcohol). Homology molecular models of these enzymes showed three conserved and two differing residues in the distal side of the heme (the latter representing two different positions of a phenylalanine residue). Interestingly, replacement of the C. virescens UPO Phe88 by the homologous residue in the D. caldariorum UPO resulted in an F88L variant with 5- to 21-fold-higher efficiency in oxidizing these aromatic compounds. IMPORTANCE UPOs catalyze regio- and stereoselective oxygenations of both aromatic and aliphatic compounds. Similar reactions were previously described for cytochrome P450 monooxygenases, but UPOs have the noteworthy biotechnological advantage of being stable enzymes requiring only H(2)O(2) to be activated. Both characteristics are related to the extracellular nature of UPOs as secreted proteins. In the present study, the limited repertoire of UPO enzymes available for organic synthesis and other applications is expanded with the description of two new ascomycete UPOs obtained by Escherichia coli expression of the corresponding genes as soluble and active enzymes. Moreover, directed mutagenesis in E. coli, together with enzyme molecular modeling, provided relevant structure-function information on aromatic substrate oxidation by these two new biocatalysts. American Society for Microbiology 2020-03-18 /pmc/articles/PMC7082571/ /pubmed/31980430 http://dx.doi.org/10.1128/AEM.02899-19 Text en Copyright © 2020 Linde et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Enzymology and Protein Engineering
Linde, Dolores
Olmedo, Andrés
González-Benjumea, Alejandro
Estévez, María
Renau-Mínguez, Chantal
Carro, Juan
Fernández-Fueyo, Elena
Gutiérrez, Ana
Martínez, Angel T.
Two New Unspecific Peroxygenases from Heterologous Expression of Fungal Genes in Escherichia coli
title Two New Unspecific Peroxygenases from Heterologous Expression of Fungal Genes in Escherichia coli
title_full Two New Unspecific Peroxygenases from Heterologous Expression of Fungal Genes in Escherichia coli
title_fullStr Two New Unspecific Peroxygenases from Heterologous Expression of Fungal Genes in Escherichia coli
title_full_unstemmed Two New Unspecific Peroxygenases from Heterologous Expression of Fungal Genes in Escherichia coli
title_short Two New Unspecific Peroxygenases from Heterologous Expression of Fungal Genes in Escherichia coli
title_sort two new unspecific peroxygenases from heterologous expression of fungal genes in escherichia coli
topic Enzymology and Protein Engineering
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7082571/
https://www.ncbi.nlm.nih.gov/pubmed/31980430
http://dx.doi.org/10.1128/AEM.02899-19
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