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Systematic Review of Polygenic Risk Scores for Type 1 and Type 2 Diabetes
Recent studies have led to considerable advances in the identification of genetic variants associated with type 1 and type 2 diabetes. An approach for converting genetic data into a predictive measure of disease susceptibility is to add the risk effects of loci into a polygenic risk score. In order...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7084489/ https://www.ncbi.nlm.nih.gov/pubmed/32131491 http://dx.doi.org/10.3390/ijms21051703 |
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author | Padilla-Martínez, Felipe Collin, Francois Kwasniewski, Miroslaw Kretowski, Adam |
author_facet | Padilla-Martínez, Felipe Collin, Francois Kwasniewski, Miroslaw Kretowski, Adam |
author_sort | Padilla-Martínez, Felipe |
collection | PubMed |
description | Recent studies have led to considerable advances in the identification of genetic variants associated with type 1 and type 2 diabetes. An approach for converting genetic data into a predictive measure of disease susceptibility is to add the risk effects of loci into a polygenic risk score. In order to summarize the recent findings, we conducted a systematic review of studies comparing the accuracy of polygenic risk scores developed during the last two decades. We selected 15 risk scores from three databases (Scopus, Web of Science and PubMed) enrolled in this systematic review. We identified three polygenic risk scores that discriminate between type 1 diabetes patients and healthy people, one that discriminate between type 1 and type 2 diabetes, two that discriminate between type 1 and monogenic diabetes and nine polygenic risk scores that discriminate between type 2 diabetes patients and healthy people. Prediction accuracy of polygenic risk scores was assessed by comparing the area under the curve. The actual benefits, potential obstacles and possible solutions for the implementation of polygenic risk scores in clinical practice were also discussed. Develop strategies to establish the clinical validity of polygenic risk scores by creating a framework for the interpretation of findings and their translation into actual evidence, are the way to demonstrate their utility in medical practice. |
format | Online Article Text |
id | pubmed-7084489 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-70844892020-03-24 Systematic Review of Polygenic Risk Scores for Type 1 and Type 2 Diabetes Padilla-Martínez, Felipe Collin, Francois Kwasniewski, Miroslaw Kretowski, Adam Int J Mol Sci Review Recent studies have led to considerable advances in the identification of genetic variants associated with type 1 and type 2 diabetes. An approach for converting genetic data into a predictive measure of disease susceptibility is to add the risk effects of loci into a polygenic risk score. In order to summarize the recent findings, we conducted a systematic review of studies comparing the accuracy of polygenic risk scores developed during the last two decades. We selected 15 risk scores from three databases (Scopus, Web of Science and PubMed) enrolled in this systematic review. We identified three polygenic risk scores that discriminate between type 1 diabetes patients and healthy people, one that discriminate between type 1 and type 2 diabetes, two that discriminate between type 1 and monogenic diabetes and nine polygenic risk scores that discriminate between type 2 diabetes patients and healthy people. Prediction accuracy of polygenic risk scores was assessed by comparing the area under the curve. The actual benefits, potential obstacles and possible solutions for the implementation of polygenic risk scores in clinical practice were also discussed. Develop strategies to establish the clinical validity of polygenic risk scores by creating a framework for the interpretation of findings and their translation into actual evidence, are the way to demonstrate their utility in medical practice. MDPI 2020-03-02 /pmc/articles/PMC7084489/ /pubmed/32131491 http://dx.doi.org/10.3390/ijms21051703 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Padilla-Martínez, Felipe Collin, Francois Kwasniewski, Miroslaw Kretowski, Adam Systematic Review of Polygenic Risk Scores for Type 1 and Type 2 Diabetes |
title | Systematic Review of Polygenic Risk Scores for Type 1 and Type 2 Diabetes |
title_full | Systematic Review of Polygenic Risk Scores for Type 1 and Type 2 Diabetes |
title_fullStr | Systematic Review of Polygenic Risk Scores for Type 1 and Type 2 Diabetes |
title_full_unstemmed | Systematic Review of Polygenic Risk Scores for Type 1 and Type 2 Diabetes |
title_short | Systematic Review of Polygenic Risk Scores for Type 1 and Type 2 Diabetes |
title_sort | systematic review of polygenic risk scores for type 1 and type 2 diabetes |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7084489/ https://www.ncbi.nlm.nih.gov/pubmed/32131491 http://dx.doi.org/10.3390/ijms21051703 |
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