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Improved detection of esp, hyl, asa1, gelE, cylA virulence genes among clinical isolates of Enterococci
OBJECTIVE: Virulence factors (VFs) among the clinical strains of enterococci play a vital role in pathogenesis. This study was aimed to screen for cylA, asa1, gelE, esp and hyl among Enterococcus faecalis (n = 89) and E. faecium (n = 51) by multiplex PCR. The previously reported multiplex PCR was mo...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7085142/ https://www.ncbi.nlm.nih.gov/pubmed/32197635 http://dx.doi.org/10.1186/s13104-020-05018-0 |
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author | Kiruthiga, Alexander Padmavathy, Kesavaram Shabana, Praveen Naveenkumar, Venkatesan Gnanadesikan, Sumathi Malaiyan, Jeevan |
author_facet | Kiruthiga, Alexander Padmavathy, Kesavaram Shabana, Praveen Naveenkumar, Venkatesan Gnanadesikan, Sumathi Malaiyan, Jeevan |
author_sort | Kiruthiga, Alexander |
collection | PubMed |
description | OBJECTIVE: Virulence factors (VFs) among the clinical strains of enterococci play a vital role in pathogenesis. This study was aimed to screen for cylA, asa1, gelE, esp and hyl among Enterococcus faecalis (n = 89) and E. faecium (n = 51) by multiplex PCR. The previously reported multiplex PCR was modified to 2 duplex (asa1 and gelE, cylA and esp) PCRs and 1 simplex (hyl) PCR. The idea of the modification of the multiplex PCR proposed here emerged in the course of the research study when majority of the isolates which phenotypically exhibited virulence traits were found to be negative for the respective gene. RESULTS: cylA, gelE and asa1 were significantly predominant in E. faecalis (59.55%, 85.39%, 86.51%) than E. faecium (1.96%, 60.78%, 9.80%) (p < 0.0001, p = 0.001967, p < 0.0001). hyl was detected in E. faecium (5.9%) only. The number of VFs detected in each isolate was recorded as the VF score. E. faecalis isolates had a VF score pattern of score 4 (34.83%), score 3 (26.96%), score 2 (28.08%) and score 1 (8.98%) while E. faecium had score 4 (1.96%), score 3 (7.84%), score 2 (25.49%) and score 1 (41.18%). This modification of the PCR protocol could resolve the problem of decreased detection of virulence determinants in enterococci. |
format | Online Article Text |
id | pubmed-7085142 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-70851422020-03-23 Improved detection of esp, hyl, asa1, gelE, cylA virulence genes among clinical isolates of Enterococci Kiruthiga, Alexander Padmavathy, Kesavaram Shabana, Praveen Naveenkumar, Venkatesan Gnanadesikan, Sumathi Malaiyan, Jeevan BMC Res Notes Research Note OBJECTIVE: Virulence factors (VFs) among the clinical strains of enterococci play a vital role in pathogenesis. This study was aimed to screen for cylA, asa1, gelE, esp and hyl among Enterococcus faecalis (n = 89) and E. faecium (n = 51) by multiplex PCR. The previously reported multiplex PCR was modified to 2 duplex (asa1 and gelE, cylA and esp) PCRs and 1 simplex (hyl) PCR. The idea of the modification of the multiplex PCR proposed here emerged in the course of the research study when majority of the isolates which phenotypically exhibited virulence traits were found to be negative for the respective gene. RESULTS: cylA, gelE and asa1 were significantly predominant in E. faecalis (59.55%, 85.39%, 86.51%) than E. faecium (1.96%, 60.78%, 9.80%) (p < 0.0001, p = 0.001967, p < 0.0001). hyl was detected in E. faecium (5.9%) only. The number of VFs detected in each isolate was recorded as the VF score. E. faecalis isolates had a VF score pattern of score 4 (34.83%), score 3 (26.96%), score 2 (28.08%) and score 1 (8.98%) while E. faecium had score 4 (1.96%), score 3 (7.84%), score 2 (25.49%) and score 1 (41.18%). This modification of the PCR protocol could resolve the problem of decreased detection of virulence determinants in enterococci. BioMed Central 2020-03-20 /pmc/articles/PMC7085142/ /pubmed/32197635 http://dx.doi.org/10.1186/s13104-020-05018-0 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Note Kiruthiga, Alexander Padmavathy, Kesavaram Shabana, Praveen Naveenkumar, Venkatesan Gnanadesikan, Sumathi Malaiyan, Jeevan Improved detection of esp, hyl, asa1, gelE, cylA virulence genes among clinical isolates of Enterococci |
title | Improved detection of esp, hyl, asa1, gelE, cylA virulence genes among clinical isolates of Enterococci |
title_full | Improved detection of esp, hyl, asa1, gelE, cylA virulence genes among clinical isolates of Enterococci |
title_fullStr | Improved detection of esp, hyl, asa1, gelE, cylA virulence genes among clinical isolates of Enterococci |
title_full_unstemmed | Improved detection of esp, hyl, asa1, gelE, cylA virulence genes among clinical isolates of Enterococci |
title_short | Improved detection of esp, hyl, asa1, gelE, cylA virulence genes among clinical isolates of Enterococci |
title_sort | improved detection of esp, hyl, asa1, gele, cyla virulence genes among clinical isolates of enterococci |
topic | Research Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7085142/ https://www.ncbi.nlm.nih.gov/pubmed/32197635 http://dx.doi.org/10.1186/s13104-020-05018-0 |
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