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Enhancing Compression Level for More Efficient Compressed Sensing and Other Lessons from NMR Spectroscopy

Modern nuclear magnetic resonance spectroscopy (NMR) is based on two- and higher-dimensional experiments that allow the solving of molecular structures, i.e., determine the relative positions of single atoms very precisely. However, rich chemical information comes at the price of long data acquisiti...

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Autores principales: Gołowicz, Dariusz, Kasprzak, Paweł, Kazimierczuk, Krzysztof
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7085760/
https://www.ncbi.nlm.nih.gov/pubmed/32121309
http://dx.doi.org/10.3390/s20051325
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author Gołowicz, Dariusz
Kasprzak, Paweł
Kazimierczuk, Krzysztof
author_facet Gołowicz, Dariusz
Kasprzak, Paweł
Kazimierczuk, Krzysztof
author_sort Gołowicz, Dariusz
collection PubMed
description Modern nuclear magnetic resonance spectroscopy (NMR) is based on two- and higher-dimensional experiments that allow the solving of molecular structures, i.e., determine the relative positions of single atoms very precisely. However, rich chemical information comes at the price of long data acquisition times (up to several days). This problem can be alleviated by compressed sensing (CS)—a method that revolutionized many fields of technology. It is known that CS performs the most efficiently when measured objects feature a high level of compressibility, which in the case of NMR signal means that its frequency domain representation (spectrum) has a low number of significant points. However, many NMR spectroscopists are not aware of the fact that various well-known signal acquisition procedures enhance compressibility and thus should be used prior to CS reconstruction. In this study, we discuss such procedures and show to what extent they are complementary to CS approaches. We believe that the survey will be useful not only for NMR spectroscopists but also to inspire the broader signal processing community.
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spelling pubmed-70857602020-03-25 Enhancing Compression Level for More Efficient Compressed Sensing and Other Lessons from NMR Spectroscopy Gołowicz, Dariusz Kasprzak, Paweł Kazimierczuk, Krzysztof Sensors (Basel) Article Modern nuclear magnetic resonance spectroscopy (NMR) is based on two- and higher-dimensional experiments that allow the solving of molecular structures, i.e., determine the relative positions of single atoms very precisely. However, rich chemical information comes at the price of long data acquisition times (up to several days). This problem can be alleviated by compressed sensing (CS)—a method that revolutionized many fields of technology. It is known that CS performs the most efficiently when measured objects feature a high level of compressibility, which in the case of NMR signal means that its frequency domain representation (spectrum) has a low number of significant points. However, many NMR spectroscopists are not aware of the fact that various well-known signal acquisition procedures enhance compressibility and thus should be used prior to CS reconstruction. In this study, we discuss such procedures and show to what extent they are complementary to CS approaches. We believe that the survey will be useful not only for NMR spectroscopists but also to inspire the broader signal processing community. MDPI 2020-02-28 /pmc/articles/PMC7085760/ /pubmed/32121309 http://dx.doi.org/10.3390/s20051325 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Gołowicz, Dariusz
Kasprzak, Paweł
Kazimierczuk, Krzysztof
Enhancing Compression Level for More Efficient Compressed Sensing and Other Lessons from NMR Spectroscopy
title Enhancing Compression Level for More Efficient Compressed Sensing and Other Lessons from NMR Spectroscopy
title_full Enhancing Compression Level for More Efficient Compressed Sensing and Other Lessons from NMR Spectroscopy
title_fullStr Enhancing Compression Level for More Efficient Compressed Sensing and Other Lessons from NMR Spectroscopy
title_full_unstemmed Enhancing Compression Level for More Efficient Compressed Sensing and Other Lessons from NMR Spectroscopy
title_short Enhancing Compression Level for More Efficient Compressed Sensing and Other Lessons from NMR Spectroscopy
title_sort enhancing compression level for more efficient compressed sensing and other lessons from nmr spectroscopy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7085760/
https://www.ncbi.nlm.nih.gov/pubmed/32121309
http://dx.doi.org/10.3390/s20051325
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