Cargando…

The Association of OTX1 rs17850223 Polymorphisms in Han Chinese Patients with Idiopathic Epilepsy

This study is aimed at investigating the association between orthodenticle homeobox 1 (OTX1) gene polymorphisms and idiopathic epilepsy in a cohort of Han Chinese patients. We carried out a case-control study on 147 patients with idiopathic epilepsy and 150 healthy controls. Genomic DNA was isolated...

Descripción completa

Detalles Bibliográficos
Autores principales: Lv, Jin, Qu, Chunsheng, Huang, Zhenqiang, Zhu, Yingbiao, Wang, Wei, Lan, Likang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7085824/
https://www.ncbi.nlm.nih.gov/pubmed/32211441
http://dx.doi.org/10.1155/2020/4375293
_version_ 1783509019982299136
author Lv, Jin
Qu, Chunsheng
Huang, Zhenqiang
Zhu, Yingbiao
Wang, Wei
Lan, Likang
author_facet Lv, Jin
Qu, Chunsheng
Huang, Zhenqiang
Zhu, Yingbiao
Wang, Wei
Lan, Likang
author_sort Lv, Jin
collection PubMed
description This study is aimed at investigating the association between orthodenticle homeobox 1 (OTX1) gene polymorphisms and idiopathic epilepsy in a cohort of Han Chinese patients. We carried out a case-control study on 147 patients with idiopathic epilepsy and 150 healthy controls. Genomic DNA was isolated from 1 ml of ethylene diamine tetraacetic acid (EDTA)-treated blood. The OTX1 coding sequence was divided into three parts and amplified using PCR, and the products were genotyped using the Sanger sequencing method. All OTX1 coding sequences were conserved except for rs17850223 located on the fifth exon. The frequency of the CC, CG, and GG genotypes showed no statistical differences between the idiopathic epileptic patients and the controls. The rs17850223 G allele distribution was also similar between the idiopathic epileptic patients and the controls. Interestingly, the frequency of the GG genotype was significantly higher in the patients with generalized seizures compared with that of the controls (12.2% vs. 2%, p = 0.012), and a greater distribution of the rs17850223 G allele was also seen in the patients with generalized seizures compared with controls (18.3% vs. 10%, p = 0.049). rs17850223 might play a critical role in Chinese idiopathic epileptic patients with generalized seizure activity.
format Online
Article
Text
id pubmed-7085824
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-70858242020-03-24 The Association of OTX1 rs17850223 Polymorphisms in Han Chinese Patients with Idiopathic Epilepsy Lv, Jin Qu, Chunsheng Huang, Zhenqiang Zhu, Yingbiao Wang, Wei Lan, Likang Int J Genomics Research Article This study is aimed at investigating the association between orthodenticle homeobox 1 (OTX1) gene polymorphisms and idiopathic epilepsy in a cohort of Han Chinese patients. We carried out a case-control study on 147 patients with idiopathic epilepsy and 150 healthy controls. Genomic DNA was isolated from 1 ml of ethylene diamine tetraacetic acid (EDTA)-treated blood. The OTX1 coding sequence was divided into three parts and amplified using PCR, and the products were genotyped using the Sanger sequencing method. All OTX1 coding sequences were conserved except for rs17850223 located on the fifth exon. The frequency of the CC, CG, and GG genotypes showed no statistical differences between the idiopathic epileptic patients and the controls. The rs17850223 G allele distribution was also similar between the idiopathic epileptic patients and the controls. Interestingly, the frequency of the GG genotype was significantly higher in the patients with generalized seizures compared with that of the controls (12.2% vs. 2%, p = 0.012), and a greater distribution of the rs17850223 G allele was also seen in the patients with generalized seizures compared with controls (18.3% vs. 10%, p = 0.049). rs17850223 might play a critical role in Chinese idiopathic epileptic patients with generalized seizure activity. Hindawi 2020-03-10 /pmc/articles/PMC7085824/ /pubmed/32211441 http://dx.doi.org/10.1155/2020/4375293 Text en Copyright © 2020 Jin Lv et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Lv, Jin
Qu, Chunsheng
Huang, Zhenqiang
Zhu, Yingbiao
Wang, Wei
Lan, Likang
The Association of OTX1 rs17850223 Polymorphisms in Han Chinese Patients with Idiopathic Epilepsy
title The Association of OTX1 rs17850223 Polymorphisms in Han Chinese Patients with Idiopathic Epilepsy
title_full The Association of OTX1 rs17850223 Polymorphisms in Han Chinese Patients with Idiopathic Epilepsy
title_fullStr The Association of OTX1 rs17850223 Polymorphisms in Han Chinese Patients with Idiopathic Epilepsy
title_full_unstemmed The Association of OTX1 rs17850223 Polymorphisms in Han Chinese Patients with Idiopathic Epilepsy
title_short The Association of OTX1 rs17850223 Polymorphisms in Han Chinese Patients with Idiopathic Epilepsy
title_sort association of otx1 rs17850223 polymorphisms in han chinese patients with idiopathic epilepsy
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7085824/
https://www.ncbi.nlm.nih.gov/pubmed/32211441
http://dx.doi.org/10.1155/2020/4375293
work_keys_str_mv AT lvjin theassociationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy
AT quchunsheng theassociationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy
AT huangzhenqiang theassociationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy
AT zhuyingbiao theassociationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy
AT wangwei theassociationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy
AT lanlikang theassociationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy
AT lvjin associationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy
AT quchunsheng associationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy
AT huangzhenqiang associationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy
AT zhuyingbiao associationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy
AT wangwei associationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy
AT lanlikang associationofotx1rs17850223polymorphismsinhanchinesepatientswithidiopathicepilepsy