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A multiplex PCR method for the simultaneous detection of three viruses associated with canine viral enteric infections

The aim of this study was to establish a multiplex PCR (mPCR) method that can simultaneously detect canine parvovirus (CPV-2), canine coronavirus (CCoV) and canine adenovirus (CAV), thereby eliminating the need to detect these pathogens individually. Based on conserved regions in the genomes of thes...

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Autores principales: Deng, Xiaoyu, Zhang, Jiali, Su, Jiazi, Liu, Hao, Cong, Yanlong, Zhang, Lei, Zhang, Kemeng, Shi, Ning, Lu, Rongguang, Yan, Xijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Vienna 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7086948/
https://www.ncbi.nlm.nih.gov/pubmed/29675651
http://dx.doi.org/10.1007/s00705-018-3828-4
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author Deng, Xiaoyu
Zhang, Jiali
Su, Jiazi
Liu, Hao
Cong, Yanlong
Zhang, Lei
Zhang, Kemeng
Shi, Ning
Lu, Rongguang
Yan, Xijun
author_facet Deng, Xiaoyu
Zhang, Jiali
Su, Jiazi
Liu, Hao
Cong, Yanlong
Zhang, Lei
Zhang, Kemeng
Shi, Ning
Lu, Rongguang
Yan, Xijun
author_sort Deng, Xiaoyu
collection PubMed
description The aim of this study was to establish a multiplex PCR (mPCR) method that can simultaneously detect canine parvovirus (CPV-2), canine coronavirus (CCoV) and canine adenovirus (CAV), thereby eliminating the need to detect these pathogens individually. Based on conserved regions in the genomes of these three viruses, the VP2 gene of CPV-2, the endoribonuclease nsp15 gene of CCoV, and the 52K gene of CAV were selected for primer design. The specificity of the mPCR results showed no amplification of canine distemper virus (CDV), canine parainfluenza virus (CPIV), or pseudorabies virus (PRV), indicating that the method had good specificity. A sensitivity test showed that the detection limit of the mPCR method was 1 × 10(4) viral copies. A total of 63 rectal swabs from dogs with diarrheal symptoms were evaluated using mPCR and routine PCR. The ratio of positive samples to total samples for CPV-2, CCoV, and CAV was 55.6% (35/63) for mPCR and 55.6% (35/63) for routine PCR. Thirty-five positive samples were detected by both methods, for a coincidence ratio of 100%. This mPCR method can simultaneously detect CCoV (CCoV-II), CAV (CAV-1, CAV-2) and CPV-2 (CPV-2a, CPV-2b, CPV-2c), which are associated with viral enteritis, thereby providing an efficient, inexpensive, specific, and accurate new tool for clinical diagnosis and laboratory epidemiological investigations.
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spelling pubmed-70869482020-03-23 A multiplex PCR method for the simultaneous detection of three viruses associated with canine viral enteric infections Deng, Xiaoyu Zhang, Jiali Su, Jiazi Liu, Hao Cong, Yanlong Zhang, Lei Zhang, Kemeng Shi, Ning Lu, Rongguang Yan, Xijun Arch Virol Original Article The aim of this study was to establish a multiplex PCR (mPCR) method that can simultaneously detect canine parvovirus (CPV-2), canine coronavirus (CCoV) and canine adenovirus (CAV), thereby eliminating the need to detect these pathogens individually. Based on conserved regions in the genomes of these three viruses, the VP2 gene of CPV-2, the endoribonuclease nsp15 gene of CCoV, and the 52K gene of CAV were selected for primer design. The specificity of the mPCR results showed no amplification of canine distemper virus (CDV), canine parainfluenza virus (CPIV), or pseudorabies virus (PRV), indicating that the method had good specificity. A sensitivity test showed that the detection limit of the mPCR method was 1 × 10(4) viral copies. A total of 63 rectal swabs from dogs with diarrheal symptoms were evaluated using mPCR and routine PCR. The ratio of positive samples to total samples for CPV-2, CCoV, and CAV was 55.6% (35/63) for mPCR and 55.6% (35/63) for routine PCR. Thirty-five positive samples were detected by both methods, for a coincidence ratio of 100%. This mPCR method can simultaneously detect CCoV (CCoV-II), CAV (CAV-1, CAV-2) and CPV-2 (CPV-2a, CPV-2b, CPV-2c), which are associated with viral enteritis, thereby providing an efficient, inexpensive, specific, and accurate new tool for clinical diagnosis and laboratory epidemiological investigations. Springer Vienna 2018-04-19 2018 /pmc/articles/PMC7086948/ /pubmed/29675651 http://dx.doi.org/10.1007/s00705-018-3828-4 Text en © Springer-Verlag GmbH Austria, part of Springer Nature 2018 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Article
Deng, Xiaoyu
Zhang, Jiali
Su, Jiazi
Liu, Hao
Cong, Yanlong
Zhang, Lei
Zhang, Kemeng
Shi, Ning
Lu, Rongguang
Yan, Xijun
A multiplex PCR method for the simultaneous detection of three viruses associated with canine viral enteric infections
title A multiplex PCR method for the simultaneous detection of three viruses associated with canine viral enteric infections
title_full A multiplex PCR method for the simultaneous detection of three viruses associated with canine viral enteric infections
title_fullStr A multiplex PCR method for the simultaneous detection of three viruses associated with canine viral enteric infections
title_full_unstemmed A multiplex PCR method for the simultaneous detection of three viruses associated with canine viral enteric infections
title_short A multiplex PCR method for the simultaneous detection of three viruses associated with canine viral enteric infections
title_sort multiplex pcr method for the simultaneous detection of three viruses associated with canine viral enteric infections
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7086948/
https://www.ncbi.nlm.nih.gov/pubmed/29675651
http://dx.doi.org/10.1007/s00705-018-3828-4
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