A novel strain of porcine deltacoronavirus in Vietnam

Two porcine deltacoronavirus (PDCoV) strains (Binh21 and HaNoi6) were isolated from two pig farms in North Vietnam. Phylogenetic analysis of the complete genomes and the Spike and Membrane genes revealed that the two Vietnam PDCoVs belong to the same lineage as PDCoVs from Thailand and Laos; however...

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Detalles Bibliográficos
Autores principales: Le, Van Phan, Song, Sok, An, Byung-Hyun, Park, Gyu-Nam, Pham, Ngoc Thach, Le, Dinh Quyen, Nguyen, Van Tam, Vu, Thi Thu Hang, Kim, Ki-Sun, Choe, SeEun, An, Dong-Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Vienna 2017
Materias:
Brief Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7087264/
https://www.ncbi.nlm.nih.gov/pubmed/29022111
http://dx.doi.org/10.1007/s00705-017-3594-8
Descripción
Sumario:Two porcine deltacoronavirus (PDCoV) strains (Binh21 and HaNoi6) were isolated from two pig farms in North Vietnam. Phylogenetic analysis of the complete genomes and the Spike and Membrane genes revealed that the two Vietnam PDCoVs belong to the same lineage as PDCoVs from Thailand and Laos; however, the N genes belonged to the same lineage as PDCoVs from the USA, Korea, China, and Hong Kong. The recombination detection program subsequently identified the major parent (S5011 strain) and minor parent (HKU15-44 strain) of the two Vietnam PDCoV strains (p < 0.01).

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