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Description of viral assemblages associated with the Gorgonia ventalina holobiont
The diversity and function of viruses in coral holobionts has only recently received attention. The non-reef building gorgonian octocoral, Gorgonia ventalina, is a major constituent of Caribbean reefs. We investigated viral communities associated with G. ventalina tissues to understand their role in...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer-Verlag
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7087884/ https://www.ncbi.nlm.nih.gov/pubmed/32214633 http://dx.doi.org/10.1007/s00338-011-0864-x |
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author | Hewson, I. Brown, J. M. Burge, C. A. Couch, C. S. LaBarre, B. A. Mouchka, M. E. Naito, M. Harvell, C. D. |
author_facet | Hewson, I. Brown, J. M. Burge, C. A. Couch, C. S. LaBarre, B. A. Mouchka, M. E. Naito, M. Harvell, C. D. |
author_sort | Hewson, I. |
collection | PubMed |
description | The diversity and function of viruses in coral holobionts has only recently received attention. The non-reef building gorgonian octocoral, Gorgonia ventalina, is a major constituent of Caribbean reefs. We investigated viral communities associated with G. ventalina tissues to understand their role in gorgonian ecology. Pyrosequencing was used to prepare a total of 514,632 sequence reads of DNA- and RNA-based mixed-community viral genomes (metaviromes). RNA viral assemblages were comprised of primarily unidentifiable reads, with most matching host transcripts and other RNA metaviromes. DNA metaviromes were similar between healthy and diseased tissues and comprised of contiguous sequences (contigs) that matched primarily metazoan and bacterial proteins. Only ~5% of contigs matched viral proteins that were primarily cyanophage and viruses of Chlorella and Ostreococcus. Our results confirm that DNA and RNA viruses comprise a component of the gorgonian holobiont, suggesting that they may play a role in the ecology of G. ventalina. |
format | Online Article Text |
id | pubmed-7087884 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Springer-Verlag |
record_format | MEDLINE/PubMed |
spelling | pubmed-70878842020-03-23 Description of viral assemblages associated with the Gorgonia ventalina holobiont Hewson, I. Brown, J. M. Burge, C. A. Couch, C. S. LaBarre, B. A. Mouchka, M. E. Naito, M. Harvell, C. D. Coral Reefs Note The diversity and function of viruses in coral holobionts has only recently received attention. The non-reef building gorgonian octocoral, Gorgonia ventalina, is a major constituent of Caribbean reefs. We investigated viral communities associated with G. ventalina tissues to understand their role in gorgonian ecology. Pyrosequencing was used to prepare a total of 514,632 sequence reads of DNA- and RNA-based mixed-community viral genomes (metaviromes). RNA viral assemblages were comprised of primarily unidentifiable reads, with most matching host transcripts and other RNA metaviromes. DNA metaviromes were similar between healthy and diseased tissues and comprised of contiguous sequences (contigs) that matched primarily metazoan and bacterial proteins. Only ~5% of contigs matched viral proteins that were primarily cyanophage and viruses of Chlorella and Ostreococcus. Our results confirm that DNA and RNA viruses comprise a component of the gorgonian holobiont, suggesting that they may play a role in the ecology of G. ventalina. Springer-Verlag 2011-12-29 2012 /pmc/articles/PMC7087884/ /pubmed/32214633 http://dx.doi.org/10.1007/s00338-011-0864-x Text en © Springer-Verlag 2011 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Note Hewson, I. Brown, J. M. Burge, C. A. Couch, C. S. LaBarre, B. A. Mouchka, M. E. Naito, M. Harvell, C. D. Description of viral assemblages associated with the Gorgonia ventalina holobiont |
title | Description of viral assemblages associated with the Gorgonia ventalina holobiont |
title_full | Description of viral assemblages associated with the Gorgonia ventalina holobiont |
title_fullStr | Description of viral assemblages associated with the Gorgonia ventalina holobiont |
title_full_unstemmed | Description of viral assemblages associated with the Gorgonia ventalina holobiont |
title_short | Description of viral assemblages associated with the Gorgonia ventalina holobiont |
title_sort | description of viral assemblages associated with the gorgonia ventalina holobiont |
topic | Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7087884/ https://www.ncbi.nlm.nih.gov/pubmed/32214633 http://dx.doi.org/10.1007/s00338-011-0864-x |
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