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Description of viral assemblages associated with the Gorgonia ventalina holobiont

The diversity and function of viruses in coral holobionts has only recently received attention. The non-reef building gorgonian octocoral, Gorgonia ventalina, is a major constituent of Caribbean reefs. We investigated viral communities associated with G. ventalina tissues to understand their role in...

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Autores principales: Hewson, I., Brown, J. M., Burge, C. A., Couch, C. S., LaBarre, B. A., Mouchka, M. E., Naito, M., Harvell, C. D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer-Verlag 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7087884/
https://www.ncbi.nlm.nih.gov/pubmed/32214633
http://dx.doi.org/10.1007/s00338-011-0864-x
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author Hewson, I.
Brown, J. M.
Burge, C. A.
Couch, C. S.
LaBarre, B. A.
Mouchka, M. E.
Naito, M.
Harvell, C. D.
author_facet Hewson, I.
Brown, J. M.
Burge, C. A.
Couch, C. S.
LaBarre, B. A.
Mouchka, M. E.
Naito, M.
Harvell, C. D.
author_sort Hewson, I.
collection PubMed
description The diversity and function of viruses in coral holobionts has only recently received attention. The non-reef building gorgonian octocoral, Gorgonia ventalina, is a major constituent of Caribbean reefs. We investigated viral communities associated with G. ventalina tissues to understand their role in gorgonian ecology. Pyrosequencing was used to prepare a total of 514,632 sequence reads of DNA- and RNA-based mixed-community viral genomes (metaviromes). RNA viral assemblages were comprised of primarily unidentifiable reads, with most matching host transcripts and other RNA metaviromes. DNA metaviromes were similar between healthy and diseased tissues and comprised of contiguous sequences (contigs) that matched primarily metazoan and bacterial proteins. Only ~5% of contigs matched viral proteins that were primarily cyanophage and viruses of Chlorella and Ostreococcus. Our results confirm that DNA and RNA viruses comprise a component of the gorgonian holobiont, suggesting that they may play a role in the ecology of G. ventalina.
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spelling pubmed-70878842020-03-23 Description of viral assemblages associated with the Gorgonia ventalina holobiont Hewson, I. Brown, J. M. Burge, C. A. Couch, C. S. LaBarre, B. A. Mouchka, M. E. Naito, M. Harvell, C. D. Coral Reefs Note The diversity and function of viruses in coral holobionts has only recently received attention. The non-reef building gorgonian octocoral, Gorgonia ventalina, is a major constituent of Caribbean reefs. We investigated viral communities associated with G. ventalina tissues to understand their role in gorgonian ecology. Pyrosequencing was used to prepare a total of 514,632 sequence reads of DNA- and RNA-based mixed-community viral genomes (metaviromes). RNA viral assemblages were comprised of primarily unidentifiable reads, with most matching host transcripts and other RNA metaviromes. DNA metaviromes were similar between healthy and diseased tissues and comprised of contiguous sequences (contigs) that matched primarily metazoan and bacterial proteins. Only ~5% of contigs matched viral proteins that were primarily cyanophage and viruses of Chlorella and Ostreococcus. Our results confirm that DNA and RNA viruses comprise a component of the gorgonian holobiont, suggesting that they may play a role in the ecology of G. ventalina. Springer-Verlag 2011-12-29 2012 /pmc/articles/PMC7087884/ /pubmed/32214633 http://dx.doi.org/10.1007/s00338-011-0864-x Text en © Springer-Verlag 2011 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Note
Hewson, I.
Brown, J. M.
Burge, C. A.
Couch, C. S.
LaBarre, B. A.
Mouchka, M. E.
Naito, M.
Harvell, C. D.
Description of viral assemblages associated with the Gorgonia ventalina holobiont
title Description of viral assemblages associated with the Gorgonia ventalina holobiont
title_full Description of viral assemblages associated with the Gorgonia ventalina holobiont
title_fullStr Description of viral assemblages associated with the Gorgonia ventalina holobiont
title_full_unstemmed Description of viral assemblages associated with the Gorgonia ventalina holobiont
title_short Description of viral assemblages associated with the Gorgonia ventalina holobiont
title_sort description of viral assemblages associated with the gorgonia ventalina holobiont
topic Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7087884/
https://www.ncbi.nlm.nih.gov/pubmed/32214633
http://dx.doi.org/10.1007/s00338-011-0864-x
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