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Effects of distribution of infection rate on epidemic models

A goal of many epidemic models is to compute the outcome of the epidemics from the observed infected early dynamics. However, often, the total number of infected individuals at the end of the epidemics is much lower than predicted from the early dynamics. This discrepancy is argued to result from hu...

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Autores principales: Lachiany, Menachem, Louzoun, Yoram
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Physical Society 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7088461/
https://www.ncbi.nlm.nih.gov/pubmed/27627337
http://dx.doi.org/10.1103/PhysRevE.94.022409
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author Lachiany, Menachem
Louzoun, Yoram
author_facet Lachiany, Menachem
Louzoun, Yoram
author_sort Lachiany, Menachem
collection PubMed
description A goal of many epidemic models is to compute the outcome of the epidemics from the observed infected early dynamics. However, often, the total number of infected individuals at the end of the epidemics is much lower than predicted from the early dynamics. This discrepancy is argued to result from human intervention or nonlinear dynamics not incorporated in standard models. We show that when variability in infection rates is included in standard susciptible-infected-susceptible ([Formula: see text]) and susceptible-infected-recovered ([Formula: see text]) models the total number of infected individuals in the late dynamics can be orders lower than predicted from the early dynamics. This discrepancy holds for [Formula: see text] and [Formula: see text] models, where the assumption that all individuals have the same sensitivity is eliminated. In contrast with network models, fixed partnerships are not assumed. We derive a moment closure scheme capturing the distribution of sensitivities. We find that the shape of the sensitivity distribution does not affect [Formula: see text] or the number of infected individuals in the early phases of the epidemics. However, a wide distribution of sensitivities reduces the total number of removed individuals in the [Formula: see text] model and the steady-state infected fraction in the [Formula: see text] model. The difference between the early and late dynamics implies that in order to extrapolate the expected effect of the epidemics from the initial phase of the epidemics, the rate of change in the average infectivity should be computed. These results are supported by a comparison of the theoretical model to the Ebola epidemics and by numerical simulation.
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spelling pubmed-70884612020-03-25 Effects of distribution of infection rate on epidemic models Lachiany, Menachem Louzoun, Yoram Phys Rev E Articles A goal of many epidemic models is to compute the outcome of the epidemics from the observed infected early dynamics. However, often, the total number of infected individuals at the end of the epidemics is much lower than predicted from the early dynamics. This discrepancy is argued to result from human intervention or nonlinear dynamics not incorporated in standard models. We show that when variability in infection rates is included in standard susciptible-infected-susceptible ([Formula: see text]) and susceptible-infected-recovered ([Formula: see text]) models the total number of infected individuals in the late dynamics can be orders lower than predicted from the early dynamics. This discrepancy holds for [Formula: see text] and [Formula: see text] models, where the assumption that all individuals have the same sensitivity is eliminated. In contrast with network models, fixed partnerships are not assumed. We derive a moment closure scheme capturing the distribution of sensitivities. We find that the shape of the sensitivity distribution does not affect [Formula: see text] or the number of infected individuals in the early phases of the epidemics. However, a wide distribution of sensitivities reduces the total number of removed individuals in the [Formula: see text] model and the steady-state infected fraction in the [Formula: see text] model. The difference between the early and late dynamics implies that in order to extrapolate the expected effect of the epidemics from the initial phase of the epidemics, the rate of change in the average infectivity should be computed. These results are supported by a comparison of the theoretical model to the Ebola epidemics and by numerical simulation. American Physical Society 2016-08 2016-08-11 /pmc/articles/PMC7088461/ /pubmed/27627337 http://dx.doi.org/10.1103/PhysRevE.94.022409 Text en ©2016 American Physical Society This article is made available via the PMC Open Access Subset for unrestricted re-use and analyses in any form or by any means with acknowledgement of the original source.
spellingShingle Articles
Lachiany, Menachem
Louzoun, Yoram
Effects of distribution of infection rate on epidemic models
title Effects of distribution of infection rate on epidemic models
title_full Effects of distribution of infection rate on epidemic models
title_fullStr Effects of distribution of infection rate on epidemic models
title_full_unstemmed Effects of distribution of infection rate on epidemic models
title_short Effects of distribution of infection rate on epidemic models
title_sort effects of distribution of infection rate on epidemic models
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7088461/
https://www.ncbi.nlm.nih.gov/pubmed/27627337
http://dx.doi.org/10.1103/PhysRevE.94.022409
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