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Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed?

X-ray free-electron lasers (XFELs) open the possibility of obtaining diffraction information from a single biological macromolecule. This is because XFELs can generate extremely intense x-ray pulses that are so short that diffraction data can be collected before the sample is destroyed. By collectin...

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Detalles Bibliográficos
Autores principales: Poudyal, I., Schmidt, M., Schwander, P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Crystallographic Association 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7088463/
https://www.ncbi.nlm.nih.gov/pubmed/32232074
http://dx.doi.org/10.1063/1.5144516
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author Poudyal, I.
Schmidt, M.
Schwander, P.
author_facet Poudyal, I.
Schmidt, M.
Schwander, P.
author_sort Poudyal, I.
collection PubMed
description X-ray free-electron lasers (XFELs) open the possibility of obtaining diffraction information from a single biological macromolecule. This is because XFELs can generate extremely intense x-ray pulses that are so short that diffraction data can be collected before the sample is destroyed. By collecting a sufficient number of single-particle diffraction patterns, the three-dimensional electron density of a molecule can be reconstructed ab initio. The quality of the reconstruction depends largely on the number of patterns collected at the experiment. This paper provides an estimate of the number of diffraction patterns required to reconstruct the electron density at a targeted spatial resolution. This estimate is verified by simulations for realistic x-ray fluences, repetition rates, and experimental conditions available at modern XFELs. Employing the bacterial phytochrome as a model system, we demonstrate that sub-nanometer resolution is within reach.
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spelling pubmed-70884632020-03-30 Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed? Poudyal, I. Schmidt, M. Schwander, P. Struct Dyn ARTICLES X-ray free-electron lasers (XFELs) open the possibility of obtaining diffraction information from a single biological macromolecule. This is because XFELs can generate extremely intense x-ray pulses that are so short that diffraction data can be collected before the sample is destroyed. By collecting a sufficient number of single-particle diffraction patterns, the three-dimensional electron density of a molecule can be reconstructed ab initio. The quality of the reconstruction depends largely on the number of patterns collected at the experiment. This paper provides an estimate of the number of diffraction patterns required to reconstruct the electron density at a targeted spatial resolution. This estimate is verified by simulations for realistic x-ray fluences, repetition rates, and experimental conditions available at modern XFELs. Employing the bacterial phytochrome as a model system, we demonstrate that sub-nanometer resolution is within reach. American Crystallographic Association 2020-03-20 /pmc/articles/PMC7088463/ /pubmed/32232074 http://dx.doi.org/10.1063/1.5144516 Text en © 2020 Author(s). 2329-7778/2020/7(2)/024102/12 All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle ARTICLES
Poudyal, I.
Schmidt, M.
Schwander, P.
Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed?
title Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed?
title_full Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed?
title_fullStr Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed?
title_full_unstemmed Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed?
title_short Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed?
title_sort single-particle imaging by x-ray free-electron lasers—how many snapshots are needed?
topic ARTICLES
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7088463/
https://www.ncbi.nlm.nih.gov/pubmed/32232074
http://dx.doi.org/10.1063/1.5144516
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