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Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed?
X-ray free-electron lasers (XFELs) open the possibility of obtaining diffraction information from a single biological macromolecule. This is because XFELs can generate extremely intense x-ray pulses that are so short that diffraction data can be collected before the sample is destroyed. By collectin...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Crystallographic Association
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7088463/ https://www.ncbi.nlm.nih.gov/pubmed/32232074 http://dx.doi.org/10.1063/1.5144516 |
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author | Poudyal, I. Schmidt, M. Schwander, P. |
author_facet | Poudyal, I. Schmidt, M. Schwander, P. |
author_sort | Poudyal, I. |
collection | PubMed |
description | X-ray free-electron lasers (XFELs) open the possibility of obtaining diffraction information from a single biological macromolecule. This is because XFELs can generate extremely intense x-ray pulses that are so short that diffraction data can be collected before the sample is destroyed. By collecting a sufficient number of single-particle diffraction patterns, the three-dimensional electron density of a molecule can be reconstructed ab initio. The quality of the reconstruction depends largely on the number of patterns collected at the experiment. This paper provides an estimate of the number of diffraction patterns required to reconstruct the electron density at a targeted spatial resolution. This estimate is verified by simulations for realistic x-ray fluences, repetition rates, and experimental conditions available at modern XFELs. Employing the bacterial phytochrome as a model system, we demonstrate that sub-nanometer resolution is within reach. |
format | Online Article Text |
id | pubmed-7088463 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Crystallographic Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-70884632020-03-30 Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed? Poudyal, I. Schmidt, M. Schwander, P. Struct Dyn ARTICLES X-ray free-electron lasers (XFELs) open the possibility of obtaining diffraction information from a single biological macromolecule. This is because XFELs can generate extremely intense x-ray pulses that are so short that diffraction data can be collected before the sample is destroyed. By collecting a sufficient number of single-particle diffraction patterns, the three-dimensional electron density of a molecule can be reconstructed ab initio. The quality of the reconstruction depends largely on the number of patterns collected at the experiment. This paper provides an estimate of the number of diffraction patterns required to reconstruct the electron density at a targeted spatial resolution. This estimate is verified by simulations for realistic x-ray fluences, repetition rates, and experimental conditions available at modern XFELs. Employing the bacterial phytochrome as a model system, we demonstrate that sub-nanometer resolution is within reach. American Crystallographic Association 2020-03-20 /pmc/articles/PMC7088463/ /pubmed/32232074 http://dx.doi.org/10.1063/1.5144516 Text en © 2020 Author(s). 2329-7778/2020/7(2)/024102/12 All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | ARTICLES Poudyal, I. Schmidt, M. Schwander, P. Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed? |
title | Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed? |
title_full | Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed? |
title_fullStr | Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed? |
title_full_unstemmed | Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed? |
title_short | Single-particle imaging by x-ray free-electron lasers—How many snapshots are needed? |
title_sort | single-particle imaging by x-ray free-electron lasers—how many snapshots are needed? |
topic | ARTICLES |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7088463/ https://www.ncbi.nlm.nih.gov/pubmed/32232074 http://dx.doi.org/10.1063/1.5144516 |
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