Cargando…
Molecular cloning and characterization of GuHMGR, an HMG-CoA reductase gene from liquorice (Glycyrrhiza uralensis)
A full length cDNA encoding HMGR (designated as GuHMGR) was isolated from liquorice (Glycyrrhiza uralensis) based on degenerated PCR and genome walking. The full length cDNA of GuHMGR was 2330 bp with a 1518-bp open reading frame (ORF) encoding a 505-aa polypeptide. Bioinformatics analysis indicated...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SP Higher Education Press
2011
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7089093/ https://www.ncbi.nlm.nih.gov/pubmed/32214989 http://dx.doi.org/10.1007/s11703-011-1121-3 |
_version_ | 1783509660145287168 |
---|---|
author | Ma, Chunying Liu, Chunsheng Wang, Wenquan |
author_facet | Ma, Chunying Liu, Chunsheng Wang, Wenquan |
author_sort | Ma, Chunying |
collection | PubMed |
description | A full length cDNA encoding HMGR (designated as GuHMGR) was isolated from liquorice (Glycyrrhiza uralensis) based on degenerated PCR and genome walking. The full length cDNA of GuHMGR was 2330 bp with a 1518-bp open reading frame (ORF) encoding a 505-aa polypeptide. Bioinformatics analysis indicated that there were two trans-membrane domains in GuHMGR. A molecular model of tertiary structure showed that GuHMGR is a novel HMGR with a similar spatial structure to other plant HMGRs. The deduced polypeptide of GuHMGR has an isoelectric point (pI) of 6.41 and a calculated molecular weight of about 54.7 kDa. Sequence comparison and phylogenetic tree analysis showed that GuHMGR had the highest homology with HMGRs from Pisum sativum and Medicago truncatula, indicating that GuHMGR belongs to the plant HMGR group. Expression analysis showed the similar amount of transcript level of GuHMGR in roots and leaves, suggesting that this gene was expressed constitutively in plants. Therefore, this novel HMGR gene would possibly provide a new strategy for studying the glycyrrhizin metabolism at the molecular level in the future. |
format | Online Article Text |
id | pubmed-7089093 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | SP Higher Education Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-70890932020-03-23 Molecular cloning and characterization of GuHMGR, an HMG-CoA reductase gene from liquorice (Glycyrrhiza uralensis) Ma, Chunying Liu, Chunsheng Wang, Wenquan Front Agric China Research Article A full length cDNA encoding HMGR (designated as GuHMGR) was isolated from liquorice (Glycyrrhiza uralensis) based on degenerated PCR and genome walking. The full length cDNA of GuHMGR was 2330 bp with a 1518-bp open reading frame (ORF) encoding a 505-aa polypeptide. Bioinformatics analysis indicated that there were two trans-membrane domains in GuHMGR. A molecular model of tertiary structure showed that GuHMGR is a novel HMGR with a similar spatial structure to other plant HMGRs. The deduced polypeptide of GuHMGR has an isoelectric point (pI) of 6.41 and a calculated molecular weight of about 54.7 kDa. Sequence comparison and phylogenetic tree analysis showed that GuHMGR had the highest homology with HMGRs from Pisum sativum and Medicago truncatula, indicating that GuHMGR belongs to the plant HMGR group. Expression analysis showed the similar amount of transcript level of GuHMGR in roots and leaves, suggesting that this gene was expressed constitutively in plants. Therefore, this novel HMGR gene would possibly provide a new strategy for studying the glycyrrhizin metabolism at the molecular level in the future. SP Higher Education Press 2011-09-09 2011 /pmc/articles/PMC7089093/ /pubmed/32214989 http://dx.doi.org/10.1007/s11703-011-1121-3 Text en © Higher Education Press and Springer-Verlag Berlin Heidelberg 2011 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Research Article Ma, Chunying Liu, Chunsheng Wang, Wenquan Molecular cloning and characterization of GuHMGR, an HMG-CoA reductase gene from liquorice (Glycyrrhiza uralensis) |
title | Molecular cloning and characterization of GuHMGR, an HMG-CoA reductase gene from liquorice (Glycyrrhiza uralensis) |
title_full | Molecular cloning and characterization of GuHMGR, an HMG-CoA reductase gene from liquorice (Glycyrrhiza uralensis) |
title_fullStr | Molecular cloning and characterization of GuHMGR, an HMG-CoA reductase gene from liquorice (Glycyrrhiza uralensis) |
title_full_unstemmed | Molecular cloning and characterization of GuHMGR, an HMG-CoA reductase gene from liquorice (Glycyrrhiza uralensis) |
title_short | Molecular cloning and characterization of GuHMGR, an HMG-CoA reductase gene from liquorice (Glycyrrhiza uralensis) |
title_sort | molecular cloning and characterization of guhmgr, an hmg-coa reductase gene from liquorice (glycyrrhiza uralensis) |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7089093/ https://www.ncbi.nlm.nih.gov/pubmed/32214989 http://dx.doi.org/10.1007/s11703-011-1121-3 |
work_keys_str_mv | AT machunying molecularcloningandcharacterizationofguhmgranhmgcoareductasegenefromliquoriceglycyrrhizauralensis AT liuchunsheng molecularcloningandcharacterizationofguhmgranhmgcoareductasegenefromliquoriceglycyrrhizauralensis AT wangwenquan molecularcloningandcharacterizationofguhmgranhmgcoareductasegenefromliquoriceglycyrrhizauralensis |