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Development of reverse transcription loop-mediated isothermal amplification for rapid detection of porcine epidemic diarrhea virus
In this study, a reverse transcription loop-mediated isothermal amplification (RT-LAMP) was developed for detection of porcine epidemic diarrhea virus (PEDV). Six primers were designed to amplify the nucleocapsid (N) gene of PEDV. The optimization, sensitivity, and specificity of the RT-LAMP were in...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7089436/ https://www.ncbi.nlm.nih.gov/pubmed/21286798 http://dx.doi.org/10.1007/s11262-011-0570-3 |
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author | Ren, Xiaofeng Li, Pengchong |
author_facet | Ren, Xiaofeng Li, Pengchong |
author_sort | Ren, Xiaofeng |
collection | PubMed |
description | In this study, a reverse transcription loop-mediated isothermal amplification (RT-LAMP) was developed for detection of porcine epidemic diarrhea virus (PEDV). Six primers were designed to amplify the nucleocapsid (N) gene of PEDV. The optimization, sensitivity, and specificity of the RT-LAMP were investigated. The results showed that the optimal reaction condition for RT-LAMP amplifying PEDV N gene was achieved at 63°C for 50 min. The RT-LAMP assay was more sensitive than gel-based RT-PCR and enzyme-linked immunosorbent assay. It was capable of detecting PEDV from clinical samples and differentiating PEDV from Porcine transmissible gastroenteritis virus, Porcine rotavirus, Porcine pseudorabies virus, Porcine reproductive and respiratory syndrome virus, and Avian infectious bronchitis virus. |
format | Online Article Text |
id | pubmed-7089436 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-70894362020-03-23 Development of reverse transcription loop-mediated isothermal amplification for rapid detection of porcine epidemic diarrhea virus Ren, Xiaofeng Li, Pengchong Virus Genes Article In this study, a reverse transcription loop-mediated isothermal amplification (RT-LAMP) was developed for detection of porcine epidemic diarrhea virus (PEDV). Six primers were designed to amplify the nucleocapsid (N) gene of PEDV. The optimization, sensitivity, and specificity of the RT-LAMP were investigated. The results showed that the optimal reaction condition for RT-LAMP amplifying PEDV N gene was achieved at 63°C for 50 min. The RT-LAMP assay was more sensitive than gel-based RT-PCR and enzyme-linked immunosorbent assay. It was capable of detecting PEDV from clinical samples and differentiating PEDV from Porcine transmissible gastroenteritis virus, Porcine rotavirus, Porcine pseudorabies virus, Porcine reproductive and respiratory syndrome virus, and Avian infectious bronchitis virus. Springer US 2011-02-01 2011 /pmc/articles/PMC7089436/ /pubmed/21286798 http://dx.doi.org/10.1007/s11262-011-0570-3 Text en © Springer Science+Business Media, LLC 2011 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Article Ren, Xiaofeng Li, Pengchong Development of reverse transcription loop-mediated isothermal amplification for rapid detection of porcine epidemic diarrhea virus |
title | Development of reverse transcription loop-mediated isothermal amplification for rapid detection of porcine epidemic diarrhea virus |
title_full | Development of reverse transcription loop-mediated isothermal amplification for rapid detection of porcine epidemic diarrhea virus |
title_fullStr | Development of reverse transcription loop-mediated isothermal amplification for rapid detection of porcine epidemic diarrhea virus |
title_full_unstemmed | Development of reverse transcription loop-mediated isothermal amplification for rapid detection of porcine epidemic diarrhea virus |
title_short | Development of reverse transcription loop-mediated isothermal amplification for rapid detection of porcine epidemic diarrhea virus |
title_sort | development of reverse transcription loop-mediated isothermal amplification for rapid detection of porcine epidemic diarrhea virus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7089436/ https://www.ncbi.nlm.nih.gov/pubmed/21286798 http://dx.doi.org/10.1007/s11262-011-0570-3 |
work_keys_str_mv | AT renxiaofeng developmentofreversetranscriptionloopmediatedisothermalamplificationforrapiddetectionofporcineepidemicdiarrheavirus AT lipengchong developmentofreversetranscriptionloopmediatedisothermalamplificationforrapiddetectionofporcineepidemicdiarrheavirus |