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NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment

Nanotechnology has enabled the discovery of a multitude of novel materials exhibiting unique physicochemical (PChem) properties compared to their bulk analogues. These properties have led to a rapidly increasing range of commercial applications; this, however, may come at a cost, if an association t...

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Autores principales: Afantitis, Antreas, Melagraki, Georgia, Isigonis, Panagiotis, Tsoumanis, Andreas, Varsou, Dimitra Danai, Valsami-Jones, Eugenia, Papadiamantis, Anastasios, Ellis, Laura-Jayne A., Sarimveis, Haralambos, Doganis, Philip, Karatzas, Pantelis, Tsiros, Periklis, Liampa, Irene, Lobaskin, Vladimir, Greco, Dario, Serra, Angela, Kinaret, Pia Anneli Sofia, Saarimäki, Laura Aliisa, Grafström, Roland, Kohonen, Pekka, Nymark, Penny, Willighagen, Egon, Puzyn, Tomasz, Rybinska-Fryca, Anna, Lyubartsev, Alexander, Alstrup Jensen, Keld, Brandenburg, Jan Gerit, Lofts, Stephen, Svendsen, Claus, Harrison, Samuel, Maier, Dieter, Tamm, Kaido, Jänes, Jaak, Sikk, Lauri, Dusinska, Maria, Longhin, Eleonora, Rundén-Pran, Elise, Mariussen, Espen, El Yamani, Naouale, Unger, Wolfgang, Radnik, Jörg, Tropsha, Alexander, Cohen, Yoram, Leszczynski, Jerzy, Ogilvie Hendren, Christine, Wiesner, Mark, Winkler, David, Suzuki, Noriyuki, Yoon, Tae Hyun, Choi, Jang-Sik, Sanabria, Natasha, Gulumian, Mary, Lynch, Iseult
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7090366/
https://www.ncbi.nlm.nih.gov/pubmed/32226594
http://dx.doi.org/10.1016/j.csbj.2020.02.023
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author Afantitis, Antreas
Melagraki, Georgia
Isigonis, Panagiotis
Tsoumanis, Andreas
Varsou, Dimitra Danai
Valsami-Jones, Eugenia
Papadiamantis, Anastasios
Ellis, Laura-Jayne A.
Sarimveis, Haralambos
Doganis, Philip
Karatzas, Pantelis
Tsiros, Periklis
Liampa, Irene
Lobaskin, Vladimir
Greco, Dario
Serra, Angela
Kinaret, Pia Anneli Sofia
Saarimäki, Laura Aliisa
Grafström, Roland
Kohonen, Pekka
Nymark, Penny
Willighagen, Egon
Puzyn, Tomasz
Rybinska-Fryca, Anna
Lyubartsev, Alexander
Alstrup Jensen, Keld
Brandenburg, Jan Gerit
Lofts, Stephen
Svendsen, Claus
Harrison, Samuel
Maier, Dieter
Tamm, Kaido
Jänes, Jaak
Sikk, Lauri
Dusinska, Maria
Longhin, Eleonora
Rundén-Pran, Elise
Mariussen, Espen
El Yamani, Naouale
Unger, Wolfgang
Radnik, Jörg
Tropsha, Alexander
Cohen, Yoram
Leszczynski, Jerzy
Ogilvie Hendren, Christine
Wiesner, Mark
Winkler, David
Suzuki, Noriyuki
Yoon, Tae Hyun
Choi, Jang-Sik
Sanabria, Natasha
Gulumian, Mary
Lynch, Iseult
author_facet Afantitis, Antreas
Melagraki, Georgia
Isigonis, Panagiotis
Tsoumanis, Andreas
Varsou, Dimitra Danai
Valsami-Jones, Eugenia
Papadiamantis, Anastasios
Ellis, Laura-Jayne A.
Sarimveis, Haralambos
Doganis, Philip
Karatzas, Pantelis
Tsiros, Periklis
Liampa, Irene
Lobaskin, Vladimir
Greco, Dario
Serra, Angela
Kinaret, Pia Anneli Sofia
Saarimäki, Laura Aliisa
Grafström, Roland
Kohonen, Pekka
Nymark, Penny
Willighagen, Egon
Puzyn, Tomasz
Rybinska-Fryca, Anna
Lyubartsev, Alexander
Alstrup Jensen, Keld
Brandenburg, Jan Gerit
Lofts, Stephen
Svendsen, Claus
Harrison, Samuel
Maier, Dieter
Tamm, Kaido
Jänes, Jaak
Sikk, Lauri
Dusinska, Maria
Longhin, Eleonora
Rundén-Pran, Elise
Mariussen, Espen
El Yamani, Naouale
Unger, Wolfgang
Radnik, Jörg
Tropsha, Alexander
Cohen, Yoram
Leszczynski, Jerzy
Ogilvie Hendren, Christine
Wiesner, Mark
Winkler, David
Suzuki, Noriyuki
Yoon, Tae Hyun
Choi, Jang-Sik
Sanabria, Natasha
Gulumian, Mary
Lynch, Iseult
author_sort Afantitis, Antreas
collection PubMed
description Nanotechnology has enabled the discovery of a multitude of novel materials exhibiting unique physicochemical (PChem) properties compared to their bulk analogues. These properties have led to a rapidly increasing range of commercial applications; this, however, may come at a cost, if an association to long-term health and environmental risks is discovered or even just perceived. Many nanomaterials (NMs) have not yet had their potential adverse biological effects fully assessed, due to costs and time constraints associated with the experimental assessment, frequently involving animals. Here, the available NM libraries are analyzed for their suitability for integration with novel nanoinformatics approaches and for the development of NM specific Integrated Approaches to Testing and Assessment (IATA) for human and environmental risk assessment, all within the NanoSolveIT cloud-platform. These established and well-characterized NM libraries (e.g. NanoMILE, NanoSolutions, NANoREG, NanoFASE, caLIBRAte, NanoTEST and the Nanomaterial Registry (>2000 NMs)) contain physicochemical characterization data as well as data for several relevant biological endpoints, assessed in part using harmonized Organisation for Economic Co-operation and Development (OECD) methods and test guidelines. Integration of such extensive NM information sources with the latest nanoinformatics methods will allow NanoSolveIT to model the relationships between NM structure (morphology), properties and their adverse effects and to predict the effects of other NMs for which less data is available. The project specifically addresses the needs of regulatory agencies and industry to effectively and rapidly evaluate the exposure, NM hazard and risk from nanomaterials and nano-enabled products, enabling implementation of computational ‘safe-by-design’ approaches to facilitate NM commercialization.
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spelling pubmed-70903662020-03-27 NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment Afantitis, Antreas Melagraki, Georgia Isigonis, Panagiotis Tsoumanis, Andreas Varsou, Dimitra Danai Valsami-Jones, Eugenia Papadiamantis, Anastasios Ellis, Laura-Jayne A. Sarimveis, Haralambos Doganis, Philip Karatzas, Pantelis Tsiros, Periklis Liampa, Irene Lobaskin, Vladimir Greco, Dario Serra, Angela Kinaret, Pia Anneli Sofia Saarimäki, Laura Aliisa Grafström, Roland Kohonen, Pekka Nymark, Penny Willighagen, Egon Puzyn, Tomasz Rybinska-Fryca, Anna Lyubartsev, Alexander Alstrup Jensen, Keld Brandenburg, Jan Gerit Lofts, Stephen Svendsen, Claus Harrison, Samuel Maier, Dieter Tamm, Kaido Jänes, Jaak Sikk, Lauri Dusinska, Maria Longhin, Eleonora Rundén-Pran, Elise Mariussen, Espen El Yamani, Naouale Unger, Wolfgang Radnik, Jörg Tropsha, Alexander Cohen, Yoram Leszczynski, Jerzy Ogilvie Hendren, Christine Wiesner, Mark Winkler, David Suzuki, Noriyuki Yoon, Tae Hyun Choi, Jang-Sik Sanabria, Natasha Gulumian, Mary Lynch, Iseult Comput Struct Biotechnol J Review Article Nanotechnology has enabled the discovery of a multitude of novel materials exhibiting unique physicochemical (PChem) properties compared to their bulk analogues. These properties have led to a rapidly increasing range of commercial applications; this, however, may come at a cost, if an association to long-term health and environmental risks is discovered or even just perceived. Many nanomaterials (NMs) have not yet had their potential adverse biological effects fully assessed, due to costs and time constraints associated with the experimental assessment, frequently involving animals. Here, the available NM libraries are analyzed for their suitability for integration with novel nanoinformatics approaches and for the development of NM specific Integrated Approaches to Testing and Assessment (IATA) for human and environmental risk assessment, all within the NanoSolveIT cloud-platform. These established and well-characterized NM libraries (e.g. NanoMILE, NanoSolutions, NANoREG, NanoFASE, caLIBRAte, NanoTEST and the Nanomaterial Registry (>2000 NMs)) contain physicochemical characterization data as well as data for several relevant biological endpoints, assessed in part using harmonized Organisation for Economic Co-operation and Development (OECD) methods and test guidelines. Integration of such extensive NM information sources with the latest nanoinformatics methods will allow NanoSolveIT to model the relationships between NM structure (morphology), properties and their adverse effects and to predict the effects of other NMs for which less data is available. The project specifically addresses the needs of regulatory agencies and industry to effectively and rapidly evaluate the exposure, NM hazard and risk from nanomaterials and nano-enabled products, enabling implementation of computational ‘safe-by-design’ approaches to facilitate NM commercialization. Research Network of Computational and Structural Biotechnology 2020-03-07 /pmc/articles/PMC7090366/ /pubmed/32226594 http://dx.doi.org/10.1016/j.csbj.2020.02.023 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review Article
Afantitis, Antreas
Melagraki, Georgia
Isigonis, Panagiotis
Tsoumanis, Andreas
Varsou, Dimitra Danai
Valsami-Jones, Eugenia
Papadiamantis, Anastasios
Ellis, Laura-Jayne A.
Sarimveis, Haralambos
Doganis, Philip
Karatzas, Pantelis
Tsiros, Periklis
Liampa, Irene
Lobaskin, Vladimir
Greco, Dario
Serra, Angela
Kinaret, Pia Anneli Sofia
Saarimäki, Laura Aliisa
Grafström, Roland
Kohonen, Pekka
Nymark, Penny
Willighagen, Egon
Puzyn, Tomasz
Rybinska-Fryca, Anna
Lyubartsev, Alexander
Alstrup Jensen, Keld
Brandenburg, Jan Gerit
Lofts, Stephen
Svendsen, Claus
Harrison, Samuel
Maier, Dieter
Tamm, Kaido
Jänes, Jaak
Sikk, Lauri
Dusinska, Maria
Longhin, Eleonora
Rundén-Pran, Elise
Mariussen, Espen
El Yamani, Naouale
Unger, Wolfgang
Radnik, Jörg
Tropsha, Alexander
Cohen, Yoram
Leszczynski, Jerzy
Ogilvie Hendren, Christine
Wiesner, Mark
Winkler, David
Suzuki, Noriyuki
Yoon, Tae Hyun
Choi, Jang-Sik
Sanabria, Natasha
Gulumian, Mary
Lynch, Iseult
NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment
title NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment
title_full NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment
title_fullStr NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment
title_full_unstemmed NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment
title_short NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment
title_sort nanosolveit project: driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7090366/
https://www.ncbi.nlm.nih.gov/pubmed/32226594
http://dx.doi.org/10.1016/j.csbj.2020.02.023
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