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Rapid and sensitive detection of PRRSV by a reverse transcription-loop-mediated isothermal amplification assay

A real-time monitoring reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay was developed for the sensitive and specific detection of prototypic, prevalent North American porcine reproductive and respiratory syndrome virus (PRRSV) strains. As a higher sensitivity and specific...

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Detalles Bibliográficos
Autores principales: Zhang, Lei, Liu, Ye-bing, Chen, Lei, Wang, Jian-huan, Ning, Yi-bao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SP Wuhan Institute of Virology, CAS 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7091248/
https://www.ncbi.nlm.nih.gov/pubmed/21847756
http://dx.doi.org/10.1007/s12250-011-3185-x
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author Zhang, Lei
Liu, Ye-bing
Chen, Lei
Wang, Jian-huan
Ning, Yi-bao
author_facet Zhang, Lei
Liu, Ye-bing
Chen, Lei
Wang, Jian-huan
Ning, Yi-bao
author_sort Zhang, Lei
collection PubMed
description A real-time monitoring reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay was developed for the sensitive and specific detection of prototypic, prevalent North American porcine reproductive and respiratory syndrome virus (PRRSV) strains. As a higher sensitivity and specificity method than reverse transcription polymerase chain reaction (RT-PCR), the RT-LAMP method only used a turbidimeter, exhibited a detection limit corresponding to a 10(−4) dilution of template RNA extracted from 250 μL of 10(5) of the 50% tissue culture infective dose (TCID(50)) of PRRSV-containing cells, and no cross-reactivity was observed with other related viruses including porcine circovirus type 2, swine influenza virus, porcine rotavirus and classical swine fever virus. From forty-two field samples, 33 samples in the RT-LAMP assay was detected positive, whereas three of which were not detected by RT-PCR. Furthermore, in 33 strains of PRRSV, an identical detection rate was observed with the RT-LAMP assay to what were isolated using porcine alveolar macrophages. These findings demonstrated that the RT-LAMP assay has potential clinical applications for the detection of highly pathogenic PRRSV isolates, especially in developing countries.
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spelling pubmed-70912482020-03-24 Rapid and sensitive detection of PRRSV by a reverse transcription-loop-mediated isothermal amplification assay Zhang, Lei Liu, Ye-bing Chen, Lei Wang, Jian-huan Ning, Yi-bao Virol Sin Article A real-time monitoring reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay was developed for the sensitive and specific detection of prototypic, prevalent North American porcine reproductive and respiratory syndrome virus (PRRSV) strains. As a higher sensitivity and specificity method than reverse transcription polymerase chain reaction (RT-PCR), the RT-LAMP method only used a turbidimeter, exhibited a detection limit corresponding to a 10(−4) dilution of template RNA extracted from 250 μL of 10(5) of the 50% tissue culture infective dose (TCID(50)) of PRRSV-containing cells, and no cross-reactivity was observed with other related viruses including porcine circovirus type 2, swine influenza virus, porcine rotavirus and classical swine fever virus. From forty-two field samples, 33 samples in the RT-LAMP assay was detected positive, whereas three of which were not detected by RT-PCR. Furthermore, in 33 strains of PRRSV, an identical detection rate was observed with the RT-LAMP assay to what were isolated using porcine alveolar macrophages. These findings demonstrated that the RT-LAMP assay has potential clinical applications for the detection of highly pathogenic PRRSV isolates, especially in developing countries. SP Wuhan Institute of Virology, CAS 2011-08-17 /pmc/articles/PMC7091248/ /pubmed/21847756 http://dx.doi.org/10.1007/s12250-011-3185-x Text en © Wuhan Institute of Virology, CAS and Springer-Verlag Berlin Heidelberg 2011
spellingShingle Article
Zhang, Lei
Liu, Ye-bing
Chen, Lei
Wang, Jian-huan
Ning, Yi-bao
Rapid and sensitive detection of PRRSV by a reverse transcription-loop-mediated isothermal amplification assay
title Rapid and sensitive detection of PRRSV by a reverse transcription-loop-mediated isothermal amplification assay
title_full Rapid and sensitive detection of PRRSV by a reverse transcription-loop-mediated isothermal amplification assay
title_fullStr Rapid and sensitive detection of PRRSV by a reverse transcription-loop-mediated isothermal amplification assay
title_full_unstemmed Rapid and sensitive detection of PRRSV by a reverse transcription-loop-mediated isothermal amplification assay
title_short Rapid and sensitive detection of PRRSV by a reverse transcription-loop-mediated isothermal amplification assay
title_sort rapid and sensitive detection of prrsv by a reverse transcription-loop-mediated isothermal amplification assay
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7091248/
https://www.ncbi.nlm.nih.gov/pubmed/21847756
http://dx.doi.org/10.1007/s12250-011-3185-x
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