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Relationship between mRNA stability and intron presence

Introns were found to enhance almost every steps of gene expression except increasing mRNA stability. By analyzing the genome-wide data of mRNA stability published by someone previously, we found that human intron-containing genes have more stable mRNAs than intronless genes, and the Arabidopsis tha...

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Detalles Bibliográficos
Autores principales: Wang, Hai-Fang, Feng, Liang, Niu, Deng-Ke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7092898/
https://www.ncbi.nlm.nih.gov/pubmed/17207776
http://dx.doi.org/10.1016/j.bbrc.2006.12.184
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author Wang, Hai-Fang
Feng, Liang
Niu, Deng-Ke
author_facet Wang, Hai-Fang
Feng, Liang
Niu, Deng-Ke
author_sort Wang, Hai-Fang
collection PubMed
description Introns were found to enhance almost every steps of gene expression except increasing mRNA stability. By analyzing the genome-wide data of mRNA stability published by someone previously, we found that human intron-containing genes have more stable mRNAs than intronless genes, and the Arabidopsis thaliana genes with the most unstable mRNAs have fewer introns than other genes in the genome. After controlling for mRNA length, we found mRNA stability is still positively correlated with intron number in human intron-containing genes. But in yeast Saccharomyces cerevisiae, two different datasets on mRNA half-life gave conflicting results. The components of messenger ribonucleoprotein particles recruited during intron splicing may be retained in cytoplasmic mRNPs and act as signals of mRNA stability or simply insulators to avoid mRNA degradation.
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spelling pubmed-70928982020-03-25 Relationship between mRNA stability and intron presence Wang, Hai-Fang Feng, Liang Niu, Deng-Ke Biochem Biophys Res Commun Article Introns were found to enhance almost every steps of gene expression except increasing mRNA stability. By analyzing the genome-wide data of mRNA stability published by someone previously, we found that human intron-containing genes have more stable mRNAs than intronless genes, and the Arabidopsis thaliana genes with the most unstable mRNAs have fewer introns than other genes in the genome. After controlling for mRNA length, we found mRNA stability is still positively correlated with intron number in human intron-containing genes. But in yeast Saccharomyces cerevisiae, two different datasets on mRNA half-life gave conflicting results. The components of messenger ribonucleoprotein particles recruited during intron splicing may be retained in cytoplasmic mRNPs and act as signals of mRNA stability or simply insulators to avoid mRNA degradation. Elsevier Inc. 2007-03-02 2007-01-02 /pmc/articles/PMC7092898/ /pubmed/17207776 http://dx.doi.org/10.1016/j.bbrc.2006.12.184 Text en Copyright © 2006 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Wang, Hai-Fang
Feng, Liang
Niu, Deng-Ke
Relationship between mRNA stability and intron presence
title Relationship between mRNA stability and intron presence
title_full Relationship between mRNA stability and intron presence
title_fullStr Relationship between mRNA stability and intron presence
title_full_unstemmed Relationship between mRNA stability and intron presence
title_short Relationship between mRNA stability and intron presence
title_sort relationship between mrna stability and intron presence
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7092898/
https://www.ncbi.nlm.nih.gov/pubmed/17207776
http://dx.doi.org/10.1016/j.bbrc.2006.12.184
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