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Validation of automated whole-body analysis of metabolic and morphological parameters from an integrated FDG-PET/MRI acquisition
Automated quantification of tissue morphology and tracer uptake in PET/MR images could streamline the analysis compared to traditional manual methods. To validate a single atlas image segmentation approach for automated assessment of tissue volume, fat content (FF) and glucose uptake (GU) from whole...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7093440/ https://www.ncbi.nlm.nih.gov/pubmed/32210327 http://dx.doi.org/10.1038/s41598-020-62353-9 |
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author | Guglielmo, P. Ekström, S. Strand, R. Visvanathar, R. Malmberg, F. Johansson, E. Pereira, M. J. Skrtic, S. Carlsson, B. C. L. Eriksson, J. W. Ahlström, H. Kullberg, J. |
author_facet | Guglielmo, P. Ekström, S. Strand, R. Visvanathar, R. Malmberg, F. Johansson, E. Pereira, M. J. Skrtic, S. Carlsson, B. C. L. Eriksson, J. W. Ahlström, H. Kullberg, J. |
author_sort | Guglielmo, P. |
collection | PubMed |
description | Automated quantification of tissue morphology and tracer uptake in PET/MR images could streamline the analysis compared to traditional manual methods. To validate a single atlas image segmentation approach for automated assessment of tissue volume, fat content (FF) and glucose uptake (GU) from whole-body [(18)F]FDG-PET/MR images. Twelve subjects underwent whole-body [(18)F]FDG-PET/MRI during hyperinsulinemic-euglycemic clamp. Automated analysis of tissue volumes, FF and GU were achieved using image registration to a single atlas image with reference segmentations of 18 volume of interests (VOIs). Manual segmentations by an experienced radiologist were used as reference. Quantification accuracy was assessed with Dice scores, group comparisons and correlations. VOI Dice scores ranged from 0.93 to 0.32. Muscles, brain, VAT and liver showed the highest scores. Pancreas, large and small intestines demonstrated lower segmentation accuracy and poor correlations. Estimated tissue volumes differed significantly in 8 cases. Tissue FFs were often slightly but significantly overestimated. Satisfactory agreements were observed in most tissue GUs. Automated tissue identification and characterization using a single atlas segmentation performs well compared to manual segmentation in most tissues and will be valuable in future studies. In certain tissues, alternative quantification methods or improvements to the current approach is needed. |
format | Online Article Text |
id | pubmed-7093440 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70934402020-03-27 Validation of automated whole-body analysis of metabolic and morphological parameters from an integrated FDG-PET/MRI acquisition Guglielmo, P. Ekström, S. Strand, R. Visvanathar, R. Malmberg, F. Johansson, E. Pereira, M. J. Skrtic, S. Carlsson, B. C. L. Eriksson, J. W. Ahlström, H. Kullberg, J. Sci Rep Article Automated quantification of tissue morphology and tracer uptake in PET/MR images could streamline the analysis compared to traditional manual methods. To validate a single atlas image segmentation approach for automated assessment of tissue volume, fat content (FF) and glucose uptake (GU) from whole-body [(18)F]FDG-PET/MR images. Twelve subjects underwent whole-body [(18)F]FDG-PET/MRI during hyperinsulinemic-euglycemic clamp. Automated analysis of tissue volumes, FF and GU were achieved using image registration to a single atlas image with reference segmentations of 18 volume of interests (VOIs). Manual segmentations by an experienced radiologist were used as reference. Quantification accuracy was assessed with Dice scores, group comparisons and correlations. VOI Dice scores ranged from 0.93 to 0.32. Muscles, brain, VAT and liver showed the highest scores. Pancreas, large and small intestines demonstrated lower segmentation accuracy and poor correlations. Estimated tissue volumes differed significantly in 8 cases. Tissue FFs were often slightly but significantly overestimated. Satisfactory agreements were observed in most tissue GUs. Automated tissue identification and characterization using a single atlas segmentation performs well compared to manual segmentation in most tissues and will be valuable in future studies. In certain tissues, alternative quantification methods or improvements to the current approach is needed. Nature Publishing Group UK 2020-03-24 /pmc/articles/PMC7093440/ /pubmed/32210327 http://dx.doi.org/10.1038/s41598-020-62353-9 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Guglielmo, P. Ekström, S. Strand, R. Visvanathar, R. Malmberg, F. Johansson, E. Pereira, M. J. Skrtic, S. Carlsson, B. C. L. Eriksson, J. W. Ahlström, H. Kullberg, J. Validation of automated whole-body analysis of metabolic and morphological parameters from an integrated FDG-PET/MRI acquisition |
title | Validation of automated whole-body analysis of metabolic and morphological parameters from an integrated FDG-PET/MRI acquisition |
title_full | Validation of automated whole-body analysis of metabolic and morphological parameters from an integrated FDG-PET/MRI acquisition |
title_fullStr | Validation of automated whole-body analysis of metabolic and morphological parameters from an integrated FDG-PET/MRI acquisition |
title_full_unstemmed | Validation of automated whole-body analysis of metabolic and morphological parameters from an integrated FDG-PET/MRI acquisition |
title_short | Validation of automated whole-body analysis of metabolic and morphological parameters from an integrated FDG-PET/MRI acquisition |
title_sort | validation of automated whole-body analysis of metabolic and morphological parameters from an integrated fdg-pet/mri acquisition |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7093440/ https://www.ncbi.nlm.nih.gov/pubmed/32210327 http://dx.doi.org/10.1038/s41598-020-62353-9 |
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