New 3D graphical representation of DNA sequence based on dual nucleotides

We introduce a 3D graphical representation of DNA sequences based on the pairs of dual nucleotides (DNs). Based on this representation, we consider some mathematical invariants and construct two 16-component vectors associated with these invariants. The vectors are used to characterize and compare t...

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Detalles Bibliográficos
Autores principales: Qi, Xiao-Qin, Wen, Jie, Qi, Zhao-Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2007
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7094097/
https://www.ncbi.nlm.nih.gov/pubmed/17931659
http://dx.doi.org/10.1016/j.jtbi.2007.08.025
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author Qi, Xiao-Qin
Wen, Jie
Qi, Zhao-Hui
author_facet Qi, Xiao-Qin
Wen, Jie
Qi, Zhao-Hui
author_sort Qi, Xiao-Qin
collection PubMed
description We introduce a 3D graphical representation of DNA sequences based on the pairs of dual nucleotides (DNs). Based on this representation, we consider some mathematical invariants and construct two 16-component vectors associated with these invariants. The vectors are used to characterize and compare the complete coding sequence part of beta globin gene of nine different species. The examination of similarities/dissimilarities illustrates the utility of the approach.
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spelling pubmed-70940972020-03-25 New 3D graphical representation of DNA sequence based on dual nucleotides Qi, Xiao-Qin Wen, Jie Qi, Zhao-Hui J Theor Biol Article We introduce a 3D graphical representation of DNA sequences based on the pairs of dual nucleotides (DNs). Based on this representation, we consider some mathematical invariants and construct two 16-component vectors associated with these invariants. The vectors are used to characterize and compare the complete coding sequence part of beta globin gene of nine different species. The examination of similarities/dissimilarities illustrates the utility of the approach. Elsevier Ltd. 2007-12-21 2007-09-01 /pmc/articles/PMC7094097/ /pubmed/17931659 http://dx.doi.org/10.1016/j.jtbi.2007.08.025 Text en Copyright © 2007 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Qi, Xiao-Qin
Wen, Jie
Qi, Zhao-Hui
New 3D graphical representation of DNA sequence based on dual nucleotides
title New 3D graphical representation of DNA sequence based on dual nucleotides
title_full New 3D graphical representation of DNA sequence based on dual nucleotides
title_fullStr New 3D graphical representation of DNA sequence based on dual nucleotides
title_full_unstemmed New 3D graphical representation of DNA sequence based on dual nucleotides
title_short New 3D graphical representation of DNA sequence based on dual nucleotides
title_sort new 3d graphical representation of dna sequence based on dual nucleotides
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7094097/
https://www.ncbi.nlm.nih.gov/pubmed/17931659
http://dx.doi.org/10.1016/j.jtbi.2007.08.025
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