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Generality of endemic prevalence formulae

In simple infection models, the susceptible proportion s(*) in endemic equilibrium is related to the basic reproduction number R(0) by [Formula: see text]. We investigate the extent to which this relationship remains valid under more realistic modelling assumptions. In particular, we relax the biolo...

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Autor principal: Clancy, Damian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7094683/
https://www.ncbi.nlm.nih.gov/pubmed/26321688
http://dx.doi.org/10.1016/j.mbs.2015.08.011
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author Clancy, Damian
author_facet Clancy, Damian
author_sort Clancy, Damian
collection PubMed
description In simple infection models, the susceptible proportion s(*) in endemic equilibrium is related to the basic reproduction number R(0) by [Formula: see text]. We investigate the extent to which this relationship remains valid under more realistic modelling assumptions. In particular, we relax the biologically implausible assumptions that individuals’ lifetimes and infectious periods follow exponential distributions; allow a general recruitment process; allow for multiple stages of infection; and consider extension to a multigroup model in which the groups may represent, for instance, spatial heterogeneity, or the existence of super-spreaders. For a homogeneous population, we find that: (i) the susceptible proportion is [Formula: see text] where [Formula: see text] is a modified reproduction number, equal to R(0) only in certain circumstances; (ii) the proportions of the population in each stage of infection are proportional to the expected time spent by an infected individual in that stage before recovery or death. We demonstrate robustness of the formula [Formula: see text] for many human infections by noting conditions under which [Formula: see text] is approximately equal to R(0), while pointing out other circumstances under which this approximation fails. For heterogeneous populations, the formula [Formula: see text] does not hold in general, but we are able to exhibit symmetry conditions under which it is valid.
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spelling pubmed-70946832020-03-25 Generality of endemic prevalence formulae Clancy, Damian Math Biosci Article In simple infection models, the susceptible proportion s(*) in endemic equilibrium is related to the basic reproduction number R(0) by [Formula: see text]. We investigate the extent to which this relationship remains valid under more realistic modelling assumptions. In particular, we relax the biologically implausible assumptions that individuals’ lifetimes and infectious periods follow exponential distributions; allow a general recruitment process; allow for multiple stages of infection; and consider extension to a multigroup model in which the groups may represent, for instance, spatial heterogeneity, or the existence of super-spreaders. For a homogeneous population, we find that: (i) the susceptible proportion is [Formula: see text] where [Formula: see text] is a modified reproduction number, equal to R(0) only in certain circumstances; (ii) the proportions of the population in each stage of infection are proportional to the expected time spent by an infected individual in that stage before recovery or death. We demonstrate robustness of the formula [Formula: see text] for many human infections by noting conditions under which [Formula: see text] is approximately equal to R(0), while pointing out other circumstances under which this approximation fails. For heterogeneous populations, the formula [Formula: see text] does not hold in general, but we are able to exhibit symmetry conditions under which it is valid. Elsevier Inc. 2015-11 2015-08-29 /pmc/articles/PMC7094683/ /pubmed/26321688 http://dx.doi.org/10.1016/j.mbs.2015.08.011 Text en Copyright © 2015 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Clancy, Damian
Generality of endemic prevalence formulae
title Generality of endemic prevalence formulae
title_full Generality of endemic prevalence formulae
title_fullStr Generality of endemic prevalence formulae
title_full_unstemmed Generality of endemic prevalence formulae
title_short Generality of endemic prevalence formulae
title_sort generality of endemic prevalence formulae
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7094683/
https://www.ncbi.nlm.nih.gov/pubmed/26321688
http://dx.doi.org/10.1016/j.mbs.2015.08.011
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