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Some properties of a simple stochastic epidemic model of SIR type

We investigate the properties of a simple discrete time stochastic epidemic model. The model is Markovian of the SIR type in which the total population is constant and individuals meet a random number of other individuals at each time step. Individuals remain infectious for R time units, after which...

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Autores principales: Tuckwell, Henry C., Williams, Ruth J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7094774/
https://www.ncbi.nlm.nih.gov/pubmed/17173939
http://dx.doi.org/10.1016/j.mbs.2006.09.018
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author Tuckwell, Henry C.
Williams, Ruth J.
author_facet Tuckwell, Henry C.
Williams, Ruth J.
author_sort Tuckwell, Henry C.
collection PubMed
description We investigate the properties of a simple discrete time stochastic epidemic model. The model is Markovian of the SIR type in which the total population is constant and individuals meet a random number of other individuals at each time step. Individuals remain infectious for R time units, after which they become removed or immune. Individual transition probabilities from susceptible to diseased states are given in terms of the binomial distribution. An expression is given for the probability that any individuals beyond those initially infected become diseased. In the model with a finite recovery time R, simulations reveal large variability in both the total number of infected individuals and in the total duration of the epidemic, even when the variability in number of contacts per day is small. In the case of no recovery, R = ∞, a formal diffusion approximation is obtained for the number infected. The mean for the diffusion process can be approximated by a logistic which is more accurate for larger contact rates or faster developing epidemics. For finite R we then proceed mainly by simulation and investigate in the mean the effects of varying the parameters p (the probability of transmission), R, and the number of contacts per day per individual. A scale invariant property is noted for the size of an outbreak in relation to the total population size. Most notable are the existence of maxima in the duration of an epidemic as a function of R and the extremely large differences in the sizes of outbreaks which can occur for small changes in R. These findings have practical applications in controlling the size and duration of epidemics and hence reducing their human and economic costs.
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spelling pubmed-70947742020-03-25 Some properties of a simple stochastic epidemic model of SIR type Tuckwell, Henry C. Williams, Ruth J. Math Biosci Article We investigate the properties of a simple discrete time stochastic epidemic model. The model is Markovian of the SIR type in which the total population is constant and individuals meet a random number of other individuals at each time step. Individuals remain infectious for R time units, after which they become removed or immune. Individual transition probabilities from susceptible to diseased states are given in terms of the binomial distribution. An expression is given for the probability that any individuals beyond those initially infected become diseased. In the model with a finite recovery time R, simulations reveal large variability in both the total number of infected individuals and in the total duration of the epidemic, even when the variability in number of contacts per day is small. In the case of no recovery, R = ∞, a formal diffusion approximation is obtained for the number infected. The mean for the diffusion process can be approximated by a logistic which is more accurate for larger contact rates or faster developing epidemics. For finite R we then proceed mainly by simulation and investigate in the mean the effects of varying the parameters p (the probability of transmission), R, and the number of contacts per day per individual. A scale invariant property is noted for the size of an outbreak in relation to the total population size. Most notable are the existence of maxima in the duration of an epidemic as a function of R and the extremely large differences in the sizes of outbreaks which can occur for small changes in R. These findings have practical applications in controlling the size and duration of epidemics and hence reducing their human and economic costs. Elsevier Inc. 2007-07 2006-10-11 /pmc/articles/PMC7094774/ /pubmed/17173939 http://dx.doi.org/10.1016/j.mbs.2006.09.018 Text en Copyright © 2006 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Tuckwell, Henry C.
Williams, Ruth J.
Some properties of a simple stochastic epidemic model of SIR type
title Some properties of a simple stochastic epidemic model of SIR type
title_full Some properties of a simple stochastic epidemic model of SIR type
title_fullStr Some properties of a simple stochastic epidemic model of SIR type
title_full_unstemmed Some properties of a simple stochastic epidemic model of SIR type
title_short Some properties of a simple stochastic epidemic model of SIR type
title_sort some properties of a simple stochastic epidemic model of sir type
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7094774/
https://www.ncbi.nlm.nih.gov/pubmed/17173939
http://dx.doi.org/10.1016/j.mbs.2006.09.018
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