Cargando…

Comprehensive evaluation of complex polymicrobial specimens using next generation sequencing and standard microbiological culture

Optimal clinical decision-making depends on identification of clinically relevant organisms present in a sample. Standard microbiological culture may fail to identify unusual or fastidious organisms and can misrepresent relative abundance of sample constituents. Culture-independent methods have impr...

Descripción completa

Detalles Bibliográficos
Autores principales:	Cummings, Lisa A., Hoogestraat, Daniel R., Rassoulian-Barrett, Sara L., Rosenthal, Christopher A., Salipante, Stephen J., Cookson, Brad T., Hoffman, Noah G.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2020
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7096443/ https://www.ncbi.nlm.nih.gov/pubmed/32214207 http://dx.doi.org/10.1038/s41598-020-62424-x

Ejemplares similares

Rapid 16S rRNA Next-Generation Sequencing of Polymicrobial Clinical Samples for Diagnosis of Complex Bacterial Infections
por: Salipante, Stephen J., et al.
Publicado: (2013)

In Silico Evaluation of Variant Calling Methods for Bacterial Whole-Genome Sequencing Assays
por: Seah, Yee Mey, et al.
Publicado: (2023)

Bartonella spp. Infections Identified by Molecular Methods, United States
por: McCormick, David W., et al.
Publicado: (2023)

Characterization of a Multidrug-Resistant, Novel Bacteroides Genomospecies
por: Salipante, Stephen J., et al.
Publicado: (2015)

Identification of Leptotrichia goodfellowii infective endocarditis by next-generation sequencing of 16S rDNA amplicons
por: Lieberman, Joshua A., et al.
Publicado: (2021)

Cell free DNA from respiratory pathogens is detectable in the blood plasma of Cystic Fibrosis patients
por: Barrett, Sara L. Rassoulian, et al.
Publicado: (2020)

Polymicrobial Bloodstream Infection in Neonates: Microbiology, Clinical Characteristics, and Risk Factors
por: Tsai, Ming-Horng, et al.
Publicado: (2014)

Polymicrobial intensive care unit-acquired pneumonia: prevalence, microbiology and outcome
por: Ferrer, Miquel, et al.
Publicado: (2015)

Microbiological Analysis and Mortality Risk Factors in Patients with Polymicrobial Bloodstream Infections
por: Xu, Junhong, et al.
Publicado: (2023)

Pathogen Identification Direct From Polymicrobial Specimens Using Membrane Glycolipids
por: Fondrie, William E., et al.
Publicado: (2018)

Polymicrobial Anaerobic Meningitis Detected by Next-Generation Sequencing: Case Report and Review of the Literature
por: Li, Xiaoqiang, et al.
Publicado: (2022)

Shift in the paradigm towards next-generation microbiology
por: Stres, Blaž, et al.
Publicado: (2019)

Comprehensive validation of liquid-based cytology specimens for next-generation sequencing in cancer genome analysis
por: Akahane, Toshiaki, et al.
Publicado: (2019)

Determining the utility of standard hospital microbiology testing: Comparing standard microbiology cultures with DNA sequence analysis in patients with chronic sinusitis
por: Rapoport, Sarah K., et al.
Publicado: (2019)

Impact of Next Generation Sequencing Techniques in Food Microbiology
por: Mayo, Baltasar, et al.
Publicado: (2014)

16S rRNA deep sequencing identifies Actinotignum schaalii as the major component of a polymicrobial intra-abdominal infection and implicates a urinary source
por: Bryan, Andrew, et al.
Publicado: (2017)

Effects of natural honey on polymicrobial culture of various human pathogens
por: Al-Waili, Noori S., et al.
Publicado: (2012)

331. Blood Culture Identification (BCID) Performance in Polymicrobial Bacteremia
por: Bradford, William, et al.
Publicado: (2022)

Polymicrobial Diseases
por: Haverkos, Harry W.
Publicado: (2003)

Next-Generation Sequencing of Ancient and Recent Fungarium Specimens
por: Miller, Andrew N., et al.
Publicado: (2022)

Microbiological diagnostic performance of metagenomic next-generation sequencing compared with conventional culture for patients with community-acquired pneumonia
por: Lin, Tianlai, et al.
Publicado: (2023)

Next-generation microbiology: from comparative genomics to gene function
por: Kobras, Carolin M., et al.
Publicado: (2021)

Need for appropriate specimen for microbiology diagnosis of chronic osteomyelitis
por: Vemu, Lakshmi, et al.
Publicado: (2018)

392. Epidemiology and Treatment Outcome of Gram-Negative Polymicrobial, Gram-Positive Polymicrobial and Mixed Polymicrobial Prosthetic Joint Infection
por: Hooshmand, Babak, et al.
Publicado: (2019)

Standardizing clinical culture specimen collection in Ethiopia: a training‐of‐trainers
por: Kue, Jennifer, et al.
Publicado: (2021)

Enhanced Performance of Next-Generation Sequencing Diagnostics Compared With Standard of Care Microbiological Diagnostics in Patients Suffering From Septic Shock
por: Grumaz, Silke, et al.
Publicado: (2019)

Erratum: Microbiological diagnostic performance of metagenomic next-generation sequencing compared with conventional culture for patients with community-acquired pneumonia
Publicado: (2023)

Corrigendum: Microbiological diagnostic performance of metagenomic next-generation sequencing compared with conventional culture for patients with community-acquired pneumonia
por: Lin, Tianlai, et al.
Publicado: (2023)

314. Discordant Microbiology Cultures From Paired Osteomyelitis Bone Specimens Should Question the Current Approach to Evaluation
por: Barshes, Neal, et al.
Publicado: (2018)

Human polymicrobial infections
por: Brogden, Kim A, et al.
Publicado: (2005)

Polymicrobial airway bacterial communities in adult bronchiectasis patients
por: Purcell, Paul, et al.
Publicado: (2014)

Application of next generation sequencing technology on contamination monitoring in microbiology laboratory
por: Xiao, Yan, et al.
Publicado: (2019)

Metagenomic Next-Generation Sequencing for the Microbiological Diagnosis of Abdominal Sepsis Patients
por: Li, Dongkai, et al.
Publicado: (2022)

The microbiological diagnostic performance of metagenomic next-generation sequencing in patients with sepsis
por: Ren, Di, et al.
Publicado: (2021)

Next Generation and Other Sequencing Technologies in Diagnostic Microbiology and Infectious Diseases
por: Hilt, Evann E., et al.
Publicado: (2022)

Diagnostic performance and clinical impact of blood metagenomic next-generation sequencing in ICU patients suspected monomicrobial and polymicrobial bloodstream infections
por: Liu, Qilong, et al.
Publicado: (2023)

The clinical relevance of microbiology specimens in orofacial abscesses of dental origin
por: Fowell, C, et al.
Publicado: (2012)

Colon Ascendens Stent Peritonitis (CASP) - a Standardized Model for Polymicrobial Abdominal Sepsis
por: Traeger, Tobias, et al.
Publicado: (2010)

Effectiveness of polyhexamethylene biguanide, chlorhexidine, and calcium hydroxide intracanal medicament against intraradicular mature polymicrobial biofilm: A microbiological study
por: Khan, Aleena, et al.
Publicado: (2022)

Microbiologic and Cultural Interchange
por: Potter, Polyxeni
Publicado: (2007)

Cannot write session to /tmp/vufind_sessions/sess_a7ig2527s2msqi4iikd6jisc23