Cargando…

Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot

Many viruses regulate translation of polycistronic mRNA using a -1 ribosomal frameshift induced by an RNA pseudoknot. A pseudoknot has two stems that form a quasi-continuous helix and two connecting loops. A 1.6 Å crystal structure of the beet western yellow virus (BWYV) pseudoknot reveals rotation...

Descripción completa

Detalles Bibliográficos
Autores principales:	Su, Li, Chen, Liqing, Egli, Martin, Berger, James M., Rich, Alexander
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group US 1999
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7097825/ https://www.ncbi.nlm.nih.gov/pubmed/10074948 http://dx.doi.org/10.1038/6722

Ejemplares similares

An intermolecular RNA triplex provides insight into structural determinants for the pseudoknot stimulator of −1 ribosomal frameshifting
por: Chou, Ming-Yuan, et al.
Publicado: (2010)

RNA pseudoknots: Translational frameshifting and readthrough on viral RNAs
por: Ten Dam, Edwin B., et al.
Publicado: (1990)

Characterization of an efficient coronavirus ribosomal frameshifting signal: Requirement for an RNA pseudoknot
por: Brierley, Ian, et al.
Publicado: (1989)

A mechanical explanation of RNA pseudoknot function in programmed ribosomal frameshifting
por: Namy, Olivier, et al.
Publicado: (2006)

Identification of novel ligands for the RNA pseudoknot that regulate −1 ribosomal frameshifting
por: Park, So-Jung, et al.
Publicado: (2008)

Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting
por: Giedroc, David P, et al.
Publicado: (2000)

Solution structure of the pseudoknot of SRV-1 RNA, involved in ribosomal frameshifting
por: Michiels, Paul J.A, et al.
Publicado: (2001)

Small synthetic molecule-stabilized RNA pseudoknot as an activator for –1 ribosomal frameshifting
por: Matsumoto, Saki, et al.
Publicado: (2018)

Mutational analysis of the RNA pseudoknot component of a coronavirus ribosomal frameshifting signal()
por: Brierley, Ian, et al.
Publicado: (1991)

Frameshifting RNA pseudoknots: Structure and mechanism
por: Giedroc, David P., et al.
Publicado: (2009)

Structural and functional studies of retroviral RNA pseudoknots involved in ribosomal frameshifting: nucleotides at the junction of the two stems are important for efficient ribosomal frameshifting.
por: Chen, X, et al.
Publicado: (1995)

An atypical RNA pseudoknot stimulator and an upstream attenuation signal for −1 ribosomal frameshifting of SARS coronavirus
por: Su, Mei-Chi, et al.
Publicado: (2005)

The role of RNA pseudoknot stem 1 length in the promotion of efficient −1 ribosomal frameshifting
por: Napthine, Sawsan, et al.
Publicado: (1999)

Evidence for an RNA pseudoknot loop-helix interaction essential for efficient −1 ribosomal frameshifting
por: Liphardt, Jan, et al.
Publicado: (1999)

Stem–loop structures can effectively substitute for an RNA pseudoknot in −1 ribosomal frameshifting
por: Yu, Chien-Hung, et al.
Publicado: (2011)

An RNA pseudoknot stimulates HTLV-1 pro-pol programmed −1 ribosomal frameshifting
por: Thulson, Eliza, et al.
Publicado: (2020)

Pseudoknot-Dependent Programmed —1 Ribosomal Frameshifting: Structures, Mechanisms and Models
por: Brierley, Ian, et al.
Publicado: (2009)

RNA pseudoknots downstream of the frameshift sites of retroviruses
por: Shu-Yun Le, et al.
Publicado: (1991)

Functional analysis of the SRV-1 RNA frameshifting pseudoknot
por: Olsthoorn, René C. L., et al.
Publicado: (2010)

Equilibrium unfolding pathway of an H-type RNA pseudoknot which promotes programmed −1 ribosomal frameshifting
por: Theimer, Carla A., et al.
Publicado: (1999)

A Genome-Wide Analysis of RNA Pseudoknots That Stimulate Efficient −1 Ribosomal Frameshifting or Readthrough in Animal Viruses
por: Huang, Xiaolan, et al.
Publicado: (2013)

Identification and analysis of the pseudoknot-containing gag-pro ribosomal frameshift signal of simian retrovirus-1.
por: ten Dam, E, et al.
Publicado: (1994)

New Frameshifting Pseudoknot Found in SARS Virus
Publicado: (2005)

Unwinding the SARS-CoV-2 Ribosomal Frameshifting Pseudoknot with LNA and G-Clamp-Modified Phosphorothioate Oligonucleotides Inhibits Viral Replication
por: Knizhnik, Ekaterina, et al.
Publicado: (2023)

Formation of frameshift-stimulating RNA pseudoknots is facilitated by remodeling of their folding intermediates
por: Hsu, Chiung-Fang, et al.
Publicado: (2021)

Highly conserved RNA pseudoknots at the gag-pol junction of HIV-1 suggest a novel mechanism of −1 ribosomal frameshifting
por: Huang, Xiaolan, et al.
Publicado: (2014)

Mechanical unfolding kinetics of the SRV-1 gag-pro mRNA pseudoknot: possible implications for −1 ribosomal frameshifting stimulation
por: Zhong, Zhensheng, et al.
Publicado: (2016)

Torsional restraint: a new twist on frameshifting pseudoknots
por: Plant, Ewan P., et al.
Publicado: (2005)

A Three-Stemmed mRNA Pseudoknot in the SARS Coronavirus Frameshift Signal
por: Plant, Ewan P, et al.
Publicado: (2005)

Shapify: Paths to SARS-CoV-2 frameshifting pseudoknot
por: Trinity, Luke, et al.
Publicado: (2023)

Ensemble simulations: folding, unfolding and misfolding of a high-efficiency frameshifting RNA pseudoknot
por: Q. Nguyen, Khai K., et al.
Publicado: (2017)

Coordination among tertiary base pairs results in an efficient frameshift-stimulating RNA pseudoknot
por: Chen, Yu-Ting, et al.
Publicado: (2017)

Length-dependent motions of SARS-CoV-2 frameshifting RNA pseudoknot and alternative conformations suggest avenues for frameshifting suppression
por: Yan, Shuting, et al.
Publicado: (2022)

Length-dependent motions of SARS-CoV-2 frameshifting RNA pseudoknot and alternative conformations suggest avenues for frameshifting suppression
por: Yan, Shuting, et al.
Publicado: (2022)

Ribosomal Frameshifting in Decoding Plant Viral RNAs
por: Miller, W. Allen, et al.
Publicado: (2009)

Modelling the structures of frameshift-stimulatory pseudoknots from representative bat coronaviruses
por: Sekar, Rohith Vedhthaanth, et al.
Publicado: (2023)

Investigating the correlation between Xrn1-resistant RNAs and frameshifter pseudoknots
por: Dilweg, Ivar W., et al.
Publicado: (2023)

mRNA pseudoknot structures can act as ribosomal roadblocks
por: Tholstrup, Jesper, et al.
Publicado: (2012)

Crystal structure of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) frameshifting pseudoknot
por: Jones, Christopher P., et al.
Publicado: (2022)

Anti-Frameshifting Ligand Active against SARS Coronavirus-2 Is Resistant to Natural Mutations of the Frameshift-Stimulatory Pseudoknot
por: Neupane, Krishna, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_s9rk5efs9d4ud63qeeqb6p2805