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Analysis of the Extracellular Proteome of Colistin-Resistant Korean Acinetobacter baumannii Strains

[Image: see text] We analyzed the extracellular proteome of colistin-resistant Korean Acinetobacter baumannii (KAB) strains to identify proteome profiles that can be used to characterize extensively drug-resistant KAB strains. Four colistin-resistant KAB strains with colistin resistance associated w...

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Autores principales: Lee, Sang-Yeop, Yun, Sung Ho, Lee, Hayoung, Yi, Yoon-Sun, Park, Edmond Changkyun, Kim, Wooyoung, Kim, Hye-Yeon, Lee, Je Chul, Kim, Gun-Hwa, Kim, Seung Il
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2020
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7097930/
https://www.ncbi.nlm.nih.gov/pubmed/32226849
http://dx.doi.org/10.1021/acsomega.9b03723
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author Lee, Sang-Yeop
Yun, Sung Ho
Lee, Hayoung
Yi, Yoon-Sun
Park, Edmond Changkyun
Kim, Wooyoung
Kim, Hye-Yeon
Lee, Je Chul
Kim, Gun-Hwa
Kim, Seung Il
author_facet Lee, Sang-Yeop
Yun, Sung Ho
Lee, Hayoung
Yi, Yoon-Sun
Park, Edmond Changkyun
Kim, Wooyoung
Kim, Hye-Yeon
Lee, Je Chul
Kim, Gun-Hwa
Kim, Seung Il
author_sort Lee, Sang-Yeop
collection PubMed
description [Image: see text] We analyzed the extracellular proteome of colistin-resistant Korean Acinetobacter baumannii (KAB) strains to identify proteome profiles that can be used to characterize extensively drug-resistant KAB strains. Four colistin-resistant KAB strains with colistin resistance associated with point mutations in pmrB and pmrC genes were analyzed. Analysis of the extracellular proteome of these strains revealed the presence of 506 induced common proteins, which were hence considered as the core extracellular proteome. Class C ADC-30 and class D OXA-23 β-lactamases were abundantly induced in these strains. Porins (CarO and CarO-like porin), outer membrane proteins (OmpH and BamABDE), transport protein (AdeK), receptor (TonB), and several proteins of unknown function were among the specifically induced proteins. Based on the sequence homology analysis of proteins from the core proteome and those of other A. baumannii strains and pathogenic bacterial species as well as further in silico screening, we propose that CarO-like porin is an A. baumannii-specific protein and that two tryptic peptides that originate from CarO-like porin detected by tandem mass spectrometry are peptide makers of this protein.
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spelling pubmed-70979302020-03-27 Analysis of the Extracellular Proteome of Colistin-Resistant Korean Acinetobacter baumannii Strains Lee, Sang-Yeop Yun, Sung Ho Lee, Hayoung Yi, Yoon-Sun Park, Edmond Changkyun Kim, Wooyoung Kim, Hye-Yeon Lee, Je Chul Kim, Gun-Hwa Kim, Seung Il ACS Omega [Image: see text] We analyzed the extracellular proteome of colistin-resistant Korean Acinetobacter baumannii (KAB) strains to identify proteome profiles that can be used to characterize extensively drug-resistant KAB strains. Four colistin-resistant KAB strains with colistin resistance associated with point mutations in pmrB and pmrC genes were analyzed. Analysis of the extracellular proteome of these strains revealed the presence of 506 induced common proteins, which were hence considered as the core extracellular proteome. Class C ADC-30 and class D OXA-23 β-lactamases were abundantly induced in these strains. Porins (CarO and CarO-like porin), outer membrane proteins (OmpH and BamABDE), transport protein (AdeK), receptor (TonB), and several proteins of unknown function were among the specifically induced proteins. Based on the sequence homology analysis of proteins from the core proteome and those of other A. baumannii strains and pathogenic bacterial species as well as further in silico screening, we propose that CarO-like porin is an A. baumannii-specific protein and that two tryptic peptides that originate from CarO-like porin detected by tandem mass spectrometry are peptide makers of this protein. American Chemical Society 2020-03-11 /pmc/articles/PMC7097930/ /pubmed/32226849 http://dx.doi.org/10.1021/acsomega.9b03723 Text en Copyright © 2020 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes.
spellingShingle Lee, Sang-Yeop
Yun, Sung Ho
Lee, Hayoung
Yi, Yoon-Sun
Park, Edmond Changkyun
Kim, Wooyoung
Kim, Hye-Yeon
Lee, Je Chul
Kim, Gun-Hwa
Kim, Seung Il
Analysis of the Extracellular Proteome of Colistin-Resistant Korean Acinetobacter baumannii Strains
title Analysis of the Extracellular Proteome of Colistin-Resistant Korean Acinetobacter baumannii Strains
title_full Analysis of the Extracellular Proteome of Colistin-Resistant Korean Acinetobacter baumannii Strains
title_fullStr Analysis of the Extracellular Proteome of Colistin-Resistant Korean Acinetobacter baumannii Strains
title_full_unstemmed Analysis of the Extracellular Proteome of Colistin-Resistant Korean Acinetobacter baumannii Strains
title_short Analysis of the Extracellular Proteome of Colistin-Resistant Korean Acinetobacter baumannii Strains
title_sort analysis of the extracellular proteome of colistin-resistant korean acinetobacter baumannii strains
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7097930/
https://www.ncbi.nlm.nih.gov/pubmed/32226849
http://dx.doi.org/10.1021/acsomega.9b03723
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