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Structural Assessment of Hydrogen Bonds on Methylpentynol–Azide Clusters To Achieve Regiochemical Outcome of 1,3-Dipolar Cycloaddition Reactions Using Density Functional Theory

[Image: see text] This study was focused on the geometries and properties of the structural isomers obtained from a random walk of methylpentynol–HN(3) clusters. The theoretical aspects of hydrogen bonding effects on the discussed 1,3-dipolar cycloaddition (1,3-DC) reactions [between methylpentynol...

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Autores principales: Hashemi, Marzieh, Taherpour, Avat Arman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2020
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7098023/
https://www.ncbi.nlm.nih.gov/pubmed/32226877
http://dx.doi.org/10.1021/acsomega.9b04333
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author Hashemi, Marzieh
Taherpour, Avat Arman
author_facet Hashemi, Marzieh
Taherpour, Avat Arman
author_sort Hashemi, Marzieh
collection PubMed
description [Image: see text] This study was focused on the geometries and properties of the structural isomers obtained from a random walk of methylpentynol–HN(3) clusters. The theoretical aspects of hydrogen bonding effects on the discussed 1,3-dipolar cycloaddition (1,3-DC) reactions [between methylpentynol (a) as a dipolarophile and azide (b) as a 1,3-dipole] have shown regioselective output concepts. The dipolarophile methylpentynol (a) was applied for the treatment of insomnia. Both methylpentynol (a) and azide (b) can be H-bond acceptor and H-bond donor agents. Because of this trait of them, structures of H-bonding arrays (c–f) and methylpentynol–azide clusters (g–m) can be probable. In this work, regioselectivity of the 1,3-DC reaction [between methylpentynol (a) as a dipolarophile and azide (b) as a 1,3-dipole] was determined based on these structures (c–m) using density functional theory (DFT). The energy levels of the reactants (a and b) and the structures of H-bonding arrays (c–f), methylpentynol–azide clusters (g–m), transition states, and products (1 and 2) were studied, and also, the free energies of the reaction (Δ(r)G and ΔG(#), in kcal mol(–1)) and rate constants were determined using Eyring’s equation (k). Structural data were calculated and obtained by the DFT/B3LYP method. Seven different basis sets have been used to obtain the most appropriate results from comparison of data.
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spelling pubmed-70980232020-03-27 Structural Assessment of Hydrogen Bonds on Methylpentynol–Azide Clusters To Achieve Regiochemical Outcome of 1,3-Dipolar Cycloaddition Reactions Using Density Functional Theory Hashemi, Marzieh Taherpour, Avat Arman ACS Omega [Image: see text] This study was focused on the geometries and properties of the structural isomers obtained from a random walk of methylpentynol–HN(3) clusters. The theoretical aspects of hydrogen bonding effects on the discussed 1,3-dipolar cycloaddition (1,3-DC) reactions [between methylpentynol (a) as a dipolarophile and azide (b) as a 1,3-dipole] have shown regioselective output concepts. The dipolarophile methylpentynol (a) was applied for the treatment of insomnia. Both methylpentynol (a) and azide (b) can be H-bond acceptor and H-bond donor agents. Because of this trait of them, structures of H-bonding arrays (c–f) and methylpentynol–azide clusters (g–m) can be probable. In this work, regioselectivity of the 1,3-DC reaction [between methylpentynol (a) as a dipolarophile and azide (b) as a 1,3-dipole] was determined based on these structures (c–m) using density functional theory (DFT). The energy levels of the reactants (a and b) and the structures of H-bonding arrays (c–f), methylpentynol–azide clusters (g–m), transition states, and products (1 and 2) were studied, and also, the free energies of the reaction (Δ(r)G and ΔG(#), in kcal mol(–1)) and rate constants were determined using Eyring’s equation (k). Structural data were calculated and obtained by the DFT/B3LYP method. Seven different basis sets have been used to obtain the most appropriate results from comparison of data. American Chemical Society 2020-03-10 /pmc/articles/PMC7098023/ /pubmed/32226877 http://dx.doi.org/10.1021/acsomega.9b04333 Text en Copyright © 2020 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes.
spellingShingle Hashemi, Marzieh
Taherpour, Avat Arman
Structural Assessment of Hydrogen Bonds on Methylpentynol–Azide Clusters To Achieve Regiochemical Outcome of 1,3-Dipolar Cycloaddition Reactions Using Density Functional Theory
title Structural Assessment of Hydrogen Bonds on Methylpentynol–Azide Clusters To Achieve Regiochemical Outcome of 1,3-Dipolar Cycloaddition Reactions Using Density Functional Theory
title_full Structural Assessment of Hydrogen Bonds on Methylpentynol–Azide Clusters To Achieve Regiochemical Outcome of 1,3-Dipolar Cycloaddition Reactions Using Density Functional Theory
title_fullStr Structural Assessment of Hydrogen Bonds on Methylpentynol–Azide Clusters To Achieve Regiochemical Outcome of 1,3-Dipolar Cycloaddition Reactions Using Density Functional Theory
title_full_unstemmed Structural Assessment of Hydrogen Bonds on Methylpentynol–Azide Clusters To Achieve Regiochemical Outcome of 1,3-Dipolar Cycloaddition Reactions Using Density Functional Theory
title_short Structural Assessment of Hydrogen Bonds on Methylpentynol–Azide Clusters To Achieve Regiochemical Outcome of 1,3-Dipolar Cycloaddition Reactions Using Density Functional Theory
title_sort structural assessment of hydrogen bonds on methylpentynol–azide clusters to achieve regiochemical outcome of 1,3-dipolar cycloaddition reactions using density functional theory
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7098023/
https://www.ncbi.nlm.nih.gov/pubmed/32226877
http://dx.doi.org/10.1021/acsomega.9b04333
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