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Multi-scale characterizations of colon polyps via computed tomographic colonography

Texture features have played an essential role in the field of medical imaging for computer-aided diagnosis. The gray-level co-occurrence matrix (GLCM)-based texture descriptor has emerged to become one of the most successful feature sets for these applications. This study aims to increase the poten...

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Autores principales: Cao, Weiguo, Pomeroy, Marc J., Gao, Yongfeng, Barish, Matthew A., Abbasi, Almas F., Pickhardt, Perry J., Liang, Zhengrong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Singapore 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7099560/
https://www.ncbi.nlm.nih.gov/pubmed/32240410
http://dx.doi.org/10.1186/s42492-019-0032-7
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author Cao, Weiguo
Pomeroy, Marc J.
Gao, Yongfeng
Barish, Matthew A.
Abbasi, Almas F.
Pickhardt, Perry J.
Liang, Zhengrong
author_facet Cao, Weiguo
Pomeroy, Marc J.
Gao, Yongfeng
Barish, Matthew A.
Abbasi, Almas F.
Pickhardt, Perry J.
Liang, Zhengrong
author_sort Cao, Weiguo
collection PubMed
description Texture features have played an essential role in the field of medical imaging for computer-aided diagnosis. The gray-level co-occurrence matrix (GLCM)-based texture descriptor has emerged to become one of the most successful feature sets for these applications. This study aims to increase the potential of these features by introducing multi-scale analysis into the construction of GLCM texture descriptor. In this study, we first introduce a new parameter - stride, to explore the definition of GLCM. Then we propose three multi-scaling GLCM models according to its three parameters, (1) learning model by multiple displacements, (2) learning model by multiple strides (LMS), and (3) learning model by multiple angles. These models increase the texture information by introducing more texture patterns and mitigate direction sparsity and dense sampling problems presented in the traditional Haralick model. To further analyze the three parameters, we test the three models by performing classification on a dataset of 63 large polyp masses obtained from computed tomography colonoscopy consisting of 32 adenocarcinomas and 31 benign adenomas. Finally, the proposed methods are compared to several typical GLCM-texture descriptors and one deep learning model. LMS obtains the highest performance and enhances the prediction power to 0.9450 with standard deviation 0.0285 by area under the curve of receiver operating characteristics score which is a significant improvement.
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spelling pubmed-70995602020-03-31 Multi-scale characterizations of colon polyps via computed tomographic colonography Cao, Weiguo Pomeroy, Marc J. Gao, Yongfeng Barish, Matthew A. Abbasi, Almas F. Pickhardt, Perry J. Liang, Zhengrong Vis Comput Ind Biomed Art Review Texture features have played an essential role in the field of medical imaging for computer-aided diagnosis. The gray-level co-occurrence matrix (GLCM)-based texture descriptor has emerged to become one of the most successful feature sets for these applications. This study aims to increase the potential of these features by introducing multi-scale analysis into the construction of GLCM texture descriptor. In this study, we first introduce a new parameter - stride, to explore the definition of GLCM. Then we propose three multi-scaling GLCM models according to its three parameters, (1) learning model by multiple displacements, (2) learning model by multiple strides (LMS), and (3) learning model by multiple angles. These models increase the texture information by introducing more texture patterns and mitigate direction sparsity and dense sampling problems presented in the traditional Haralick model. To further analyze the three parameters, we test the three models by performing classification on a dataset of 63 large polyp masses obtained from computed tomography colonoscopy consisting of 32 adenocarcinomas and 31 benign adenomas. Finally, the proposed methods are compared to several typical GLCM-texture descriptors and one deep learning model. LMS obtains the highest performance and enhances the prediction power to 0.9450 with standard deviation 0.0285 by area under the curve of receiver operating characteristics score which is a significant improvement. Springer Singapore 2019-12-27 /pmc/articles/PMC7099560/ /pubmed/32240410 http://dx.doi.org/10.1186/s42492-019-0032-7 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Review
Cao, Weiguo
Pomeroy, Marc J.
Gao, Yongfeng
Barish, Matthew A.
Abbasi, Almas F.
Pickhardt, Perry J.
Liang, Zhengrong
Multi-scale characterizations of colon polyps via computed tomographic colonography
title Multi-scale characterizations of colon polyps via computed tomographic colonography
title_full Multi-scale characterizations of colon polyps via computed tomographic colonography
title_fullStr Multi-scale characterizations of colon polyps via computed tomographic colonography
title_full_unstemmed Multi-scale characterizations of colon polyps via computed tomographic colonography
title_short Multi-scale characterizations of colon polyps via computed tomographic colonography
title_sort multi-scale characterizations of colon polyps via computed tomographic colonography
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7099560/
https://www.ncbi.nlm.nih.gov/pubmed/32240410
http://dx.doi.org/10.1186/s42492-019-0032-7
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