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Predicting Short-term Survival after Liver Transplantation using Machine Learning
Liver transplantation is one of the most effective treatments for end-stage liver disease, but the demand for livers is much higher than the available donor livers. Model for End-stage Liver Disease (MELD) score is a commonly used approach to prioritize patients, but previous studies have indicated...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7101323/ https://www.ncbi.nlm.nih.gov/pubmed/32221367 http://dx.doi.org/10.1038/s41598-020-62387-z |
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author | Liu, Chien-Liang Soong, Ruey-Shyang Lee, Wei-Chen Jiang, Guo-Wei Lin, Yun-Chun |
author_facet | Liu, Chien-Liang Soong, Ruey-Shyang Lee, Wei-Chen Jiang, Guo-Wei Lin, Yun-Chun |
author_sort | Liu, Chien-Liang |
collection | PubMed |
description | Liver transplantation is one of the most effective treatments for end-stage liver disease, but the demand for livers is much higher than the available donor livers. Model for End-stage Liver Disease (MELD) score is a commonly used approach to prioritize patients, but previous studies have indicated that MELD score may fail to predict well for the postoperative patients. This work proposes to use data-driven approach to devise a predictive model to predict postoperative survival within 30 days based on patient’s preoperative physiological measurement values. We use random forest (RF) to select important features, including clinically used features and new features discovered from physiological measurement values. Moreover, we propose a new imputation method to deal with the problem of missing values and the results show that it outperforms the other alternatives. In the predictive model, we use patients’ blood test data within 1–9 days before surgery to construct the model to predict postoperative patients’ survival. The experimental results on a real data set indicate that RF outperforms the other alternatives. The experimental results on the temporal validation set show that our proposed model achieves area under the curve (AUC) of 0.771 and specificity of 0.815, showing superior discrimination power in predicting postoperative survival. |
format | Online Article Text |
id | pubmed-7101323 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-71013232020-03-31 Predicting Short-term Survival after Liver Transplantation using Machine Learning Liu, Chien-Liang Soong, Ruey-Shyang Lee, Wei-Chen Jiang, Guo-Wei Lin, Yun-Chun Sci Rep Article Liver transplantation is one of the most effective treatments for end-stage liver disease, but the demand for livers is much higher than the available donor livers. Model for End-stage Liver Disease (MELD) score is a commonly used approach to prioritize patients, but previous studies have indicated that MELD score may fail to predict well for the postoperative patients. This work proposes to use data-driven approach to devise a predictive model to predict postoperative survival within 30 days based on patient’s preoperative physiological measurement values. We use random forest (RF) to select important features, including clinically used features and new features discovered from physiological measurement values. Moreover, we propose a new imputation method to deal with the problem of missing values and the results show that it outperforms the other alternatives. In the predictive model, we use patients’ blood test data within 1–9 days before surgery to construct the model to predict postoperative patients’ survival. The experimental results on a real data set indicate that RF outperforms the other alternatives. The experimental results on the temporal validation set show that our proposed model achieves area under the curve (AUC) of 0.771 and specificity of 0.815, showing superior discrimination power in predicting postoperative survival. Nature Publishing Group UK 2020-03-27 /pmc/articles/PMC7101323/ /pubmed/32221367 http://dx.doi.org/10.1038/s41598-020-62387-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Liu, Chien-Liang Soong, Ruey-Shyang Lee, Wei-Chen Jiang, Guo-Wei Lin, Yun-Chun Predicting Short-term Survival after Liver Transplantation using Machine Learning |
title | Predicting Short-term Survival after Liver Transplantation using Machine Learning |
title_full | Predicting Short-term Survival after Liver Transplantation using Machine Learning |
title_fullStr | Predicting Short-term Survival after Liver Transplantation using Machine Learning |
title_full_unstemmed | Predicting Short-term Survival after Liver Transplantation using Machine Learning |
title_short | Predicting Short-term Survival after Liver Transplantation using Machine Learning |
title_sort | predicting short-term survival after liver transplantation using machine learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7101323/ https://www.ncbi.nlm.nih.gov/pubmed/32221367 http://dx.doi.org/10.1038/s41598-020-62387-z |
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