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Introducing Critical Pain-related Genes: A System Biology Approach

INTRODUCTION: Pain is valuable in diagnosis and also warning of the patients. Many molecular reagents are introduced which are related to pain. In this research, the pain-related genes are screened to identify the critical ones. METHODS: First, the pain-related genes were pulling out from the STRING...

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Autores principales: Rezaei Tavirani, Mostafa, Rezaei Tavirani, Sina, Zadeh-Esmaeel, Mohammad-Mahdi, Ali Ahmadi, Nayeb
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Iranian Neuroscience Society 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7101522/
https://www.ncbi.nlm.nih.gov/pubmed/32231777
http://dx.doi.org/10.32598/bcn.9.10.310
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author Rezaei Tavirani, Mostafa
Rezaei Tavirani, Sina
Zadeh-Esmaeel, Mohammad-Mahdi
Ali Ahmadi, Nayeb
author_facet Rezaei Tavirani, Mostafa
Rezaei Tavirani, Sina
Zadeh-Esmaeel, Mohammad-Mahdi
Ali Ahmadi, Nayeb
author_sort Rezaei Tavirani, Mostafa
collection PubMed
description INTRODUCTION: Pain is valuable in diagnosis and also warning of the patients. Many molecular reagents are introduced which are related to pain. In this research, the pain-related genes are screened to identify the critical ones. METHODS: First, the pain-related genes were pulling out from the STRING database, and Cytoscape software was used to make the interactome unit. Then the central genes and their neighbors were analyzed. Finally, the genes were clustered, and the essential genes were introduced. RESULTS: After analyzing 159 genes of the network, FOS, IL6, TNF, TAC1, IL8, and KNG1 were identified as the essential genes. Further analysis revealed that 88 genes are directly connected to the central genes. More resolution led to ignoring TNF and IL8 and considering SCN-alpha and PAICS as additional critical nodes. CONCLUSION: Six critical genes related to pain were identified. They can be potentially considered as new drug targets. Further investigation is required to introduce the central genes as a pain killer.
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spelling pubmed-71015222020-03-30 Introducing Critical Pain-related Genes: A System Biology Approach Rezaei Tavirani, Mostafa Rezaei Tavirani, Sina Zadeh-Esmaeel, Mohammad-Mahdi Ali Ahmadi, Nayeb Basic Clin Neurosci Research Paper INTRODUCTION: Pain is valuable in diagnosis and also warning of the patients. Many molecular reagents are introduced which are related to pain. In this research, the pain-related genes are screened to identify the critical ones. METHODS: First, the pain-related genes were pulling out from the STRING database, and Cytoscape software was used to make the interactome unit. Then the central genes and their neighbors were analyzed. Finally, the genes were clustered, and the essential genes were introduced. RESULTS: After analyzing 159 genes of the network, FOS, IL6, TNF, TAC1, IL8, and KNG1 were identified as the essential genes. Further analysis revealed that 88 genes are directly connected to the central genes. More resolution led to ignoring TNF and IL8 and considering SCN-alpha and PAICS as additional critical nodes. CONCLUSION: Six critical genes related to pain were identified. They can be potentially considered as new drug targets. Further investigation is required to introduce the central genes as a pain killer. Iranian Neuroscience Society 2019 2019-07-01 /pmc/articles/PMC7101522/ /pubmed/32231777 http://dx.doi.org/10.32598/bcn.9.10.310 Text en Copyright© 2019 Iranian Neuroscience Society http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Paper
Rezaei Tavirani, Mostafa
Rezaei Tavirani, Sina
Zadeh-Esmaeel, Mohammad-Mahdi
Ali Ahmadi, Nayeb
Introducing Critical Pain-related Genes: A System Biology Approach
title Introducing Critical Pain-related Genes: A System Biology Approach
title_full Introducing Critical Pain-related Genes: A System Biology Approach
title_fullStr Introducing Critical Pain-related Genes: A System Biology Approach
title_full_unstemmed Introducing Critical Pain-related Genes: A System Biology Approach
title_short Introducing Critical Pain-related Genes: A System Biology Approach
title_sort introducing critical pain-related genes: a system biology approach
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7101522/
https://www.ncbi.nlm.nih.gov/pubmed/32231777
http://dx.doi.org/10.32598/bcn.9.10.310
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