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Monitoring transmissibility and mortality of COVID-19 in Europe

OBJECTIVES: As a global pandemic is inevitable, real-time monitoring of transmission is vital for containing the spread of COVID-19. The main objective of this study was to report the real-time effective reproduction numbers (R(t)) and case fatality rates (CFR) in Europe. METHODS: Data for this stud...

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Autores principales: Yuan, Jing, Li, Minghui, Lv, Gang, Lu, Z. Kevin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7102547/
https://www.ncbi.nlm.nih.gov/pubmed/32234343
http://dx.doi.org/10.1016/j.ijid.2020.03.050
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author Yuan, Jing
Li, Minghui
Lv, Gang
Lu, Z. Kevin
author_facet Yuan, Jing
Li, Minghui
Lv, Gang
Lu, Z. Kevin
author_sort Yuan, Jing
collection PubMed
description OBJECTIVES: As a global pandemic is inevitable, real-time monitoring of transmission is vital for containing the spread of COVID-19. The main objective of this study was to report the real-time effective reproduction numbers (R(t)) and case fatality rates (CFR) in Europe. METHODS: Data for this study were obtained mainly from the World Health Organization website, up to March 9, 2020. R(t) were estimated by exponential growth rate (EG) and time-dependent (TD) methods. ‘R0’ package in R was employed to estimate R(t) by fitting the existing epidemic curve. Both the naïve CFR (nCFR) and adjusted CFR (aCFR) were estimated. RESULTS: With the EG method, R(t) was 3.27 (95% confidence interval (CI) 3.17–3.38) for Italy, 6.32 (95% CI 5.72–6.99) for France, 6.07 (95% CI 5.51–6.69) for Germany, and 5.08 (95% CI 4.51–5.74) for Spain. With the TD method, the R value for March 9 was 3.10 (95% CI 2.21–4.11) for Italy, 6.56 (95% CI 2.04–12.26) for France, 4.43 (95% CI 1.83–7.92) for Germany, and 3.95 (95% CI 0–10.19) for Spain. CONCLUSIONS: This study provides important findings on the early outbreak of COVID-19 in Europe. Due to the recent rapid increase in new cases of COVID-19, real-time monitoring of the transmissibility and mortality in Spain and France is a priority.
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spelling pubmed-71025472020-03-31 Monitoring transmissibility and mortality of COVID-19 in Europe Yuan, Jing Li, Minghui Lv, Gang Lu, Z. Kevin Int J Infect Dis Article OBJECTIVES: As a global pandemic is inevitable, real-time monitoring of transmission is vital for containing the spread of COVID-19. The main objective of this study was to report the real-time effective reproduction numbers (R(t)) and case fatality rates (CFR) in Europe. METHODS: Data for this study were obtained mainly from the World Health Organization website, up to March 9, 2020. R(t) were estimated by exponential growth rate (EG) and time-dependent (TD) methods. ‘R0’ package in R was employed to estimate R(t) by fitting the existing epidemic curve. Both the naïve CFR (nCFR) and adjusted CFR (aCFR) were estimated. RESULTS: With the EG method, R(t) was 3.27 (95% confidence interval (CI) 3.17–3.38) for Italy, 6.32 (95% CI 5.72–6.99) for France, 6.07 (95% CI 5.51–6.69) for Germany, and 5.08 (95% CI 4.51–5.74) for Spain. With the TD method, the R value for March 9 was 3.10 (95% CI 2.21–4.11) for Italy, 6.56 (95% CI 2.04–12.26) for France, 4.43 (95% CI 1.83–7.92) for Germany, and 3.95 (95% CI 0–10.19) for Spain. CONCLUSIONS: This study provides important findings on the early outbreak of COVID-19 in Europe. Due to the recent rapid increase in new cases of COVID-19, real-time monitoring of the transmissibility and mortality in Spain and France is a priority. The Authors. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases. 2020-06 2020-03-28 /pmc/articles/PMC7102547/ /pubmed/32234343 http://dx.doi.org/10.1016/j.ijid.2020.03.050 Text en © 2020 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Yuan, Jing
Li, Minghui
Lv, Gang
Lu, Z. Kevin
Monitoring transmissibility and mortality of COVID-19 in Europe
title Monitoring transmissibility and mortality of COVID-19 in Europe
title_full Monitoring transmissibility and mortality of COVID-19 in Europe
title_fullStr Monitoring transmissibility and mortality of COVID-19 in Europe
title_full_unstemmed Monitoring transmissibility and mortality of COVID-19 in Europe
title_short Monitoring transmissibility and mortality of COVID-19 in Europe
title_sort monitoring transmissibility and mortality of covid-19 in europe
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7102547/
https://www.ncbi.nlm.nih.gov/pubmed/32234343
http://dx.doi.org/10.1016/j.ijid.2020.03.050
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